Prevotella melaninogenica: HMPREF0659_A5760
Help
Entry
HMPREF0659_A5760 CDS
T01286
Symbol
sucD
Name
(GenBank) succinate-CoA ligase, alpha subunit
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
pmz
Prevotella melaninogenica
Pathway
pmz00020
Citrate cycle (TCA cycle)
pmz00640
Propanoate metabolism
pmz00720
Other carbon fixation pathways
pmz01100
Metabolic pathways
pmz01110
Biosynthesis of secondary metabolites
pmz01120
Microbial metabolism in diverse environments
pmz01200
Carbon metabolism
Module
pmz_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pmz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
HMPREF0659_A5760 (sucD)
00640 Propanoate metabolism
HMPREF0659_A5760 (sucD)
00660 C5-Branched dibasic acid metabolism
HMPREF0659_A5760 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
HMPREF0659_A5760 (sucD)
Enzymes [BR:
pmz01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
HMPREF0659_A5760 (sucD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
KARI_N
Motif
Other DBs
NCBI-ProteinID:
ADK95620
LinkDB
All DBs
Position
I:complement(959493..960365)
Genome browser
AA seq
290 aa
AA seq
DB search
MSILINKDTKLIVQGITGRDGSFHASKMKEYGTNVVGGTSPGKAGQEVCGIPVFNTVKDA
VAATGANASIIFVPAPFAKDAMLEAIDGGVELVICITEGVPTLDAVAAQRYAKIKGVKVI
GPNCPGLISPEESMAGIMPTNIFKKGHTGVISRSGTLTYEVVYNLTQAGLGQSTAVGVGG
DPVVGLYFEELLRMFQDDPETDSIALIGEIGGDAEERAAKFIKEHVTKPVAVFISGQQAP
PGKQMGHAGAIISSGSGSASEKIAAFEAVGVPVARETSEIPELLKKQLKK
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgagtattctaatcaataaagatacaaagttaatcgtacagggcattacaggtcgtgat
ggtagtttccacgcttctaaaatgaaggaatatggcaccaatgtggttggtggaacatct
cctggcaaggctggtcaggaagtatgcggcatccctgtattcaacacagttaaagacgct
gttgcagcaactggtgccaacgcatctattatctttgtccctgccccattcgcaaaagac
gcaatgcttgaagcaattgatggtggcgtggaactcgtcatttgtatcactgaaggcgtg
ccaacactcgatgcagttgcagcacaacgttatgctaagattaagggtgtaaaggtaatt
ggtccaaactgtccaggacttatttctccagaagagagtatggctggcattatgccaact
aatatcttcaagaagggacatacgggtgttatcagccgtagtggtacactgacctatgag
gttgtgtataacctcacacaagcaggtttaggacaatcaacagcagttggtgttggtggt
gacccagtcgttggactttatttcgaggaacttctccgtatgttccaggatgacccagag
acagatagtattgcactcattggagagattggcggtgatgctgaagagcgtgcagctaag
tttatcaaagagcatgttacaaagcctgtagcagtatttatctctggtcagcaagctcct
ccgggcaaacagatgggacacgctggtgctatcatctcaagtggctctggttctgcaagc
gaaaagattgcagcttttgaggctgtaggtgtacctgttgcacgtgagacaagtgaaata
ccagaactccttaagaagcaattaaagaagtaa
DBGET
integrated database retrieval system
