Prevotella melaninogenica: HMPREF0659_A5948
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Entry
HMPREF0659_A5948 CDS
T01286
Name
(GenBank) Sigma-54 interaction domain protein
Organism
pmz
Prevotella melaninogenica
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_2
AAA_5
HTH_50
HTH_28
Mg_chelatase
HTH_23
RWP-RK
HTH_30
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
ADK95333
LinkDB
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Position
I:1183382..1184623
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AA seq
413 aa
AA seq
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MNTTELQRTKQRYNIVGNNDGLNRALDVALQVAPTDLSVLIIGESGVGKEIIPRVIHDNS
PRRREKYFAINCGSIPEGTIDSELFGHEKGSFTGAIGDSEGYFGIANKGTIFLDEVGELP
LATQARLLRVLETGEYIRVGGQEIRKTDVRIVAATNVNMQKAVSEGKFREDLYYRLNTIP
IQMPPLRDRGEDIVLLFRLFAMQMAEKYHLPKITLTDEARQILLQYKWPGNVRQLKNITE
QMSVLSEKREIDAETLLHFIPRDQDSTQLATIQSGGSHSYESEREILYKILYELRGNVSD
LRRDLNNVRKQLEESRQLNGASGFQPTPSTVSNLPATTSKQPITPTRTIEQVEDAVAEEI
SEPETLNLNDIGKQLVEKALERNNGNRKKAALELGISDRTLYRRIRQYGLDKD
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaacagaattacagaggaccaaacaacgatataacattgttggtaacaacgac
ggactgaatcgtgcactggatgttgctttacaggtagcacccactgatttgtctgtactg
attatcggtgagagcggtgttggtaaggagattatcccacgtgtaatccacgacaattct
cctcgtcgtcgcgagaaatactttgctatcaactgtggttctatcccagaagggaccatt
gatagtgaacttttcggtcatgagaagggttctttcacaggagctattggcgatagtgaa
ggttatttcggtatagccaacaaaggaaccatcttcctcgacgaggtgggtgaacttcct
ttagcaacacaagctcgactgcttcgcgtactcgaaacaggtgaatatatccgtgttggt
ggtcaggaaatccgtaagacagatgtacgtatcgtagctgctactaacgtcaacatgcag
aaagctgttagcgaaggtaagttccgtgaagatttatactatcgtcttaacactattcca
attcagatgccaccactccgtgatcgtggcgaagatatcgttcttctcttccgcctcttt
gctatgcagatggctgagaagtatcatcttccaaaaattacactcacagatgaagcacgc
cagattctgttacagtacaaatggcctggcaatgtccgtcaattaaagaacattactgag
cagatgtctgtcctaagcgagaagcgtgagattgatgcagaaacattgctacatttcatc
ccacgtgaccaagacagcacacagcttgctacgatacaaagtggtggttcacatagctat
gagagtgaacgtgagattctctataaaattctctatgagttgagaggtaatgtaagtgac
ttacgacgtgacctcaacaacgttcgtaagcagttggaggaaagcagacaactcaatggt
gcaagcggtttccagcctactccgtcaacagtttctaatcttcctgctaccacaagcaaa
cagcctatcactccaacacgaacgatagaacaggttgaagacgctgtggcagaagaaata
tctgaaccagagacactcaacctcaacgacattggaaagcaactggtggagaaagcctta
gagcgtaacaatggaaatcgtaagaaagctgctttagagttgggcatcagcgaccgcaca
ctctatcgccgaatcagacaatacggattagacaaagattaa
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