Prevotella melaninogenica: HMPREF0659_A5975
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Entry
HMPREF0659_A5975 CDS
T01286
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pmz
Prevotella melaninogenica
Pathway
pmz03030
DNA replication
pmz03430
Mismatch repair
pmz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HMPREF0659_A5975 (holA)
03430 Mismatch repair
HMPREF0659_A5975 (holA)
03440 Homologous recombination
HMPREF0659_A5975 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmz03032
]
HMPREF0659_A5975 (holA)
03400 DNA repair and recombination proteins [BR:
pmz03400
]
HMPREF0659_A5975 (holA)
Enzymes [BR:
pmz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HMPREF0659_A5975 (holA)
DNA replication proteins [BR:
pmz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HMPREF0659_A5975 (holA)
DNA repair and recombination proteins [BR:
pmz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HMPREF0659_A5975 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
PTA_PTB
DNA_pol3_delta_C
Glycos_transf_2
Motif
Other DBs
NCBI-ProteinID:
ADK95576
LinkDB
All DBs
Position
I:complement(1222157..1223182)
Genome browser
AA seq
341 aa
AA seq
DB search
MPAKQGPTFQSIMQDLKNKKFAPIYMLMGEESYYIDQISGYISEHVLSPEERDFNQTICF
GSDVTAVQVADMARRYPMMAEYQVIIVKEAQNIRSLEALEKYLKNPVKSTILVWCHKNGK
IDARKKAVGLAQAVGVVFESKKLRDYQLPDFIQSYLKERKVSIDSKACQIIADHIGADLS
RLTSELDKVLISLPADNLRVTPEVVEKEIGVSKDFNTFELRNAIVQKDCFKANQIVKYFD
NNPKAGSLYSFLPLLFSYFQSLMIVHYSPRKNTEQDIAAALDLRNTWGAKDFVIGQKNYS
ARKTMEIISKIRDIDGKSKGLDNPNTGAGDLMKELIFFILH
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgccagcaaagcaaggaccaacatttcagagtattatgcaggatctgaagaataagaag
tttgctcccatctatatgctgatgggggaagagtcttattatatcgatcagatttctggt
tatatatcagagcatgttctatctccagaggaaagagattttaatcagactatctgtttt
ggatcagacgttactgctgttcaggtagcggatatggcacgacgttatcctatgatggcg
gagtatcaggtgataatcgtcaaagaggcgcagaatattcgttctttggaagcattagag
aagtacctcaaaaatcccgtaaaatcaaccatccttgtatggtgccataaaaacgggaaa
attgacgcacgtaaaaaagctgtaggattggcacaggctgtcggtgtcgtttttgaaagt
aagaagttgcgcgactatcagctaccagattttatccaaagttatttgaaggagagaaaa
gttagtatcgactcaaaggcgtgtcagataattgctgatcatattggtgcggatttaagt
cgcctcacttctgagttggataaggtgcttatctctcttcctgcagataatcttcgtgtc
accccagaagtagtggagaaggagataggtgtcagtaaagacttcaatacttttgaactt
agaaatgcgattgtacagaaggattgttttaaagcaaatcagattgtgaaatattttgac
aataatccaaaggctggttctctttattctttccttccattactcttttcttatttccaa
agtttgatgatagttcattattctcctcgaaaaaatacggaacaagatattgctgctgct
ttagatttgcgtaatacatggggagctaaagattttgtaatagggcaaaagaattattcc
gctcgcaaaacgatggagataatttctaagattcgagacatcgatgggaagagtaaagga
ttagataatcctaatactggtgcaggagatttgatgaaagagctaattttcttcatactt
cactaa
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