KEGG   Prevotella melaninogenica: HMPREF0659_A6116
Entry
HMPREF0659_A6116  CDS       T01286                                 
Symbol
hsdR
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
pmz  Prevotella melaninogenica
Brite
KEGG Orthology (KO) [BR:pmz00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pmz02048]
    HMPREF0659_A6116 (hsdR)
Enzymes [BR:pmz01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     HMPREF0659_A6116 (hsdR)
Prokaryotic defense system [BR:pmz02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   HMPREF0659_A6116 (hsdR)
SSDB
Motif
Pfam: T1RH-like_C SWI2_SNF2 HSDR_N T1R_D3-like ResIII DEAD HSDR_N_2 KdpD ATG1-like_MIT1
Other DBs
NCBI-ProteinID: ADK96073
LinkDB
Position
I:complement(1410458..1413553)
AA seq 1031 aa
MPFTEDNYEKALISLFEGMGYQYLYGPNIERDYYVPYYEAQLEESLQTVNPKKPHAAIHE
AIIKLRNIDMGSLAQRNETFTDYLQHGIEVSYFNGKEMRNEMVYLIDFEHTEKNTFQVIN
QWTFIENAEKRADIIVFVNGLPLVVVELKSPSREETDASEAYLQLRNYMKDIPSLFAFNM
FCVMSDMALSKAGTITSKEDRYMEWKTKDGNYESTEFIDYDTFFEGIFQRERLLDIIKNF
ICFAKEEKGSAKILAGYHQYFAVKKAIERTKHATVSNGKIGVFWHTQGSGKSLSMVFYAH
LLQQELSQPTIVVITDRNDLDDQLYTQFSKCKEFLRQTPVQANSRENLKELLSGREANGI
IFTTMQKFEESDEPLSERRNIIVMTDEAHRGQYGFEEKVDATTGKVSIGTARIIHNSLPN
ASYIGFTGTPISTKDRDTVEVFGDYIDIYDMTQAVNDGATCPVYYESRVINLNLDDATLQ
ALDDEYELLAEEGATTEQIEKSKKEMSHLEEILGAPATIDSLCQDILKHYEENRQYELTG
KAMIVAYSRPIAMSIYHRLLELRPTWTDKVKVVMTGSNQDPEEWHDIIGNKQYKKELARR
FKDDNDPMKIAIVVDMWLTGFDVPSLATMYVYKPMSGHNLMQAIARVNRVFNGKVGGLVV
DYIGIAKALKEAMRDYTGRDRKNFGNPDIKGMAFTKFKEKLEVCQDLFHGYNYSRFHTGT
DADRAKLIKGGVNFMLATDKQEQLPLYMKEAALLHNSITLCRSLLNKEQRFLAAFFETVR
TLLSRMTGKGKVTKKEINARISELLKQSVKSEGVINLFSDVKAEFSLFDTAFLDEISKMK
EKNIAVELLKKLLAEKVALYQKTNIVQSEKFSDLLNRSLSNYLKGLLTNEEVIQELLQLA
KEIASADSAANELGLTPEEKSFYDALTKPQAIHDFYSNEELVAMTKELTDSLRKNRTIDW
QKKESARAGMRRMIKHLLKKYHYPPEEAANALETVIKQCEQWTDNGQDNYTTHTAKMYEI
YEDEIQMAAEP
NT seq 3096 nt   +upstreamnt  +downstreamnt
atgcccttcacagaagataattacgaaaaagcactgatatccctctttgagggaatgggc
tatcaatatttgtacggtccaaatattgaaagagactactatgtgccatattatgaagca
caattagaagaaagtctgcaaactgttaatccaaagaagccacatgcagccattcacgaa
gcgattatcaaactacgcaatattgatatgggtagtttggcgcagcgtaatgaaactttt
acagactatttgcagcatggcatagaagtttcttatttcaatggcaaggaaatgcgcaat
gaaatggtctatttgatagactttgagcatacggaaaaaaatacttttcaagtcatcaac
caatggacattcattgaaaatgcagaaaaacgtgccgatatcattgtatttgtgaatggt
ttaccattggtggttgtagaattaaaatccccttctcgtgaagaaacagatgcttcagaa
gcatatcttcaactccgcaattatatgaaagatataccatcgttgttcgctttcaatatg
ttctgtgtaatgagcgatatggctctttccaaagctggaacaattactagcaaggaagat
cgctacatggaatggaaaacaaaagatggcaattatgaaagtacggaatttatcgattat
gataccttttttgaaggaatatttcaaagggaacgactcttagacataatcaagaacttt
atctgttttgccaaagaagaaaaagggagtgccaagatattagcagggtatcatcagtat
tttgcagtgaagaaagccatcgaacgtaccaaacatgctacagtaagtaatggtaaaatc
ggtgtgttctggcatacgcaaggcagcggtaaatcattgtcaatggttttctacgcccac
ttgctgcaacaagagttatcacagcccacaatagttgtgattaccgaccgcaatgatttg
gacgatcaactttatacccaattctctaaatgtaaggagttcttgcgtcaaacaccagtg
caagccaatagtcgtgagaatctaaaagagctattgagtggacgagaagctaatggcatt
atcttcacaaccatgcagaaatttgaggagtctgacgaacctttgtcagagcgaagaaat
attatcgtaatgactgatgaggcacatagaggacaatatggctttgaggaaaaagtcgat
gccactacaggtaaggtctctatcggcacggcaagaatcattcacaattcactacccaat
gcttcatatattggctttactggtacacctatctctactaaagaccgagataccgtagag
gtttttggtgattatattgatatttatgacatgacgcaggcggttaatgacggtgctact
tgtcctgtatattatgaatcgagagttattaatctaaatcttgacgatgcaaccttgcaa
gcccttgatgacgaatacgagctgttggctgaagaaggtgcaacgacagaacagatagag
aaaagcaagaaggagatgtcgcacttggaagagatactcggtgcaccagctaccatcgat
tctctttgccaagacattctcaaacactatgaggaaaaccgccaatatgaattgacaggt
aaggccatgatagtagcatattcgcgtcccatagccatgagcatttatcatcgactgttg
gagcttcgcccaacttggacagataaagtaaaagttgtcatgacgggcagcaaccaagac
ccagaagaatggcacgacattatcggaaacaagcagtataagaaagaacttgccagacga
tttaaggatgacaatgacccgatgaagattgctattgtggtcgatatgtggctcacaggc
ttcgacgttccctcattggcaactatgtatgtttacaaaccaatgagcggacataaccta
atgcaagccattgcgcgagtgaaccgcgtattcaatggcaaagtgggtggattggttgtt
gactatatcggtattgccaaggccttgaaagaagccatgcgtgattatacggggcgcgac
agaaagaactttggaaacccagatatcaaaggcatggcttttacaaagttcaaagagaag
ttggaagtgtgccaagacttatttcatggttataattatagtaggttccacacagggaca
gatgctgaccgtgctaaattaatcaaaggtggtgtaaacttcatgttggcaaccgataaa
caagaacagttaccgctctatatgaaagaagcagcattgctgcacaattccataactctt
tgccgaagcctgttgaataaagagcaacgcttcttggctgcattctttgagactgtacgc
actttactctcccgaatgacaggcaaaggaaaagttacgaagaaagaaatcaatgctcgt
attagcgagttgctgaaacaaagtgtaaaaagtgaaggtgtaatcaatcttttctctgat
gttaaagccgagttctccctctttgatacagccttcttagatgaaatttctaagatgaaa
gaaaaaaatatagctgtagaactgcttaaaaagttattagcagagaaagtggcactctat
caaaagaccaatatcgtgcagtcagagaaattctctgacctgctcaatcgttctttatcc
aactatttgaaaggattactcaccaatgaagaagttatccaagaacttttgcagttagca
aaagagattgcttcagccgattcagcagctaatgaacttggactcactcctgaagaaaag
tcattctatgatgccttgaccaaaccgcaagcaatccacgacttctatagtaatgaagaa
ctggttgccatgacaaaagaacttactgactctctacgtaagaaccgcactattgattgg
caaaagaaagaatcagcccgtgccggtatgcgcagaatgattaaacatcttctgaaaaaa
tatcattacccaccagaggaagctgccaatgcattagaaactgtcattaagcaatgcgag
cagtggacggataatggacaagataattatacaactcacacagccaagatgtatgaaatt
tatgaagatgaaatacagatggctgcagaaccataa

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