Prevotella melaninogenica: HMPREF0659_A6315
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Entry
HMPREF0659_A6315 CDS
T01286
Symbol
secD
Name
(GenBank) export membrane protein SecD
KO
K12257
SecD/SecF fusion protein
Organism
pmz
Prevotella melaninogenica
Pathway
pmz02024
Quorum sensing
pmz03060
Protein export
pmz03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pmz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
HMPREF0659_A6315 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HMPREF0659_A6315 (secD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HMPREF0659_A6315 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pmz02044
]
HMPREF0659_A6315 (secD)
Secretion system [BR:
pmz02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
HMPREF0659_A6315 (secD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
Motif
Other DBs
NCBI-ProteinID:
ADK96230
LinkDB
All DBs
Position
I:complement(1663401..1666421)
Genome browser
AA seq
1006 aa
AA seq
DB search
MQNKGLVICVAILLTLASIFYLSFSVATSYYDGQAAKIKDPIAQQDYKDSVKYLGLYSYQ
KCLETQIGLGLDLKGGMNVVLEISVPDVVDFLADHKQDAAYQKALETAKQEEMHSPKDFI
SLFVDAFHKVAPGHKLAEIFATQQLKGKVSTQSTDEEVEKALREEVASAIDNSYNVVTNR
IDQYGVVQPNIQKLEGQEGRLMVEMPGIREPERMRKLLQGSANLEFWETYNNQEITPYLV
QLDQRLANGETKVDTAATDSTKKVQAKAAATPKFALNKGNAAKGEDAQMAALKKMHPLLS
MLQTIPGDALSLVGYASVRDTAAINKMIYGQLAKQILPSDLKLLWSAKPEDGLNKKNVYG
LYALKITTSDGRAPLEGDVVTDAKDDFNQHGRPQVSMTMNSEGAREWAALTKANVGKAIA
IVLDGVVYSAPRVDGEISGGQSSISGNFTIEDTKDLANTLKSGRMPAPAKIVQEEVVGPT
LGAQSIEQGLISFAIAFVLLMLYMIVMYNFIPGMMANLALIANLFFTLGVLASFQSALTM
PGIAGIVLTLGTAVDANVLIYERIKEELKLGKGMKQALSEGYGNAFSAIFDSNLTSLITG
VILLVTGTGPIRGFATTWIIGIVISFFTAVFLTRLVFENRVSKDKWLNQTFTTGFSKNFM
QGKNYHFLSMYKTTFTVWGVAVLVCIVSFAVRGLSRSIDFTGGRNYVVTLNKPTHVEDVR
KVMQGAFVNTVGENAGKPATTTVIALGTDGKTVRVSTNYNIDSNNPAEDDKAETILYNAL
KKGGFVSQASVQNFKNPDIREGGSIIQSAKVGPSIAKSITYNAIMSVLLAIFFIFLYILL
RFRNIGFSVGSIVGLVLDTTIVIGCFSLCYGWIGFSLEIDQTFIGAILTVIGYDINDTVV
VYDRIRENLGKHKHNLAKADIQKIFNDSINQTLSRTINTSVSTLIVLVSIFILGGESIRS
FSFAMIIGIIIGTLSSIFIASPVAYLVLGKKIEKRSHELAEAPVEA
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacaaaggattagtaatttgcgtagccattctcttgacgctcgcaagtatcttc
tacctgtcattttcagtagcgacaagctactatgatggtcaggcagcaaagattaaagac
cctattgcgcaacaggattataaggattctgtaaagtatttggggctctactcttaccag
aaatgccttgaaacacagatcggtcttggtcttgacttgaagggcggtatgaacgttgta
ctcgagatttcggtacctgatgttgttgatttcttggcagatcacaagcaggatgctgct
tatcagaaggctttggaaacagcaaagcaggaagagatgcacagtccaaaggactttatc
tctctctttgtagatgctttccacaaggttgctccgggtcataaacttgctgagatcttc
gctacacagcagctcaaaggcaaggttagcacacagagtacagacgaagaggttgagaaa
gcactccgtgaagaggttgcttcagccatcgataactcatacaatgtcgttacaaaccgt
atcgaccagtatggtgttgtacagccaaatatccagaagttggaaggtcaggaaggtcga
ctcatggtcgaaatgcctggtattcgtgagccagagcgtatgcgtaagctccttcagggt
tctgctaaccttgagttctgggagacttataacaaccaagaaataactccttacctcgtt
cagctcgaccagcgtttggctaatggtgagacaaaggttgacactgctgcaactgattct
actaagaaggtacaggcaaaggcagctgcaactccaaagtttgcactcaataaaggcaat
gctgcaaagggcgaagatgctcagatggcagcattgaagaagatgcacccattgctctct
atgctgcagactatccctggtgacgcacttagcctcgtaggttatgcaagcgtacgtgat
acagctgctatcaataagatgatttatggtcagcttgctaagcagattttgccaagtgac
ttgaagcttctttggagcgctaagccagaagacggacttaataagaagaacgtatatggt
ctttatgctttgaagattactacttcagacggtcgtgctccattggagggtgacgttgtt
acagatgctaaagacgattttaatcaacatggtcgtcctcaggttagcatgacaatgaac
tctgaaggtgctcgtgagtgggctgctttgacaaaggcaaatgtaggtaaggcaatcgca
atcgtactcgatggcgttgtttactcagctccacgtgttgacggtgagatatctggtggc
cagtcatctatctctggtaacttcacaattgaggatactaaggacttggctaacacattg
aagtcaggtcgtatgcctgctcctgcaaagattgtacaggaggaagtcgtaggtcctaca
cttggtgcacagtctattgagcagggacttatctcttttgctattgctttcgtactcttg
atgctttacatgattgtcatgtacaacttcattccaggtatgatggctaaccttgctttg
atagccaacctcttcttcacgttgggtgtcttagcgtccttccagtcggcattgactatg
ccaggtattgccggtatcgtgttgaccttgggtacagctgtggatgctaacgtgcttatc
tacgagcgtattaaggaggagttgaaacttggtaagggtatgaagcaggctttgagtgag
ggttatggaaatgctttctcagctatcttcgactctaacttgacatcactcatcactggt
gttatccttcttgtgactggtactggtcctatccgtggtttcgctacaacttggatcatt
ggtatcgttatctcattcttcactgcagtattcctcacacgtcttgtatttgagaaccgt
gtaagcaaggataagtggttgaatcagactttcacaacaggattctctaagaacttcatg
cagggtaagaactatcacttccttagcatgtataagacaaccttcactgtttggggtgtt
gctgtcttggtatgtattgtcagcttcgctgttcgtggcttgagtcgcagtattgacttc
actggtggtcgcaactatgttgtcacattaaacaagcctacccatgtagaggacgttcgt
aaggtgatgcaaggtgccttcgtaaatactgttggtgagaatgcaggtaagcctgctaca
acaactgttattgcgttgggtacagatggtaagactgttcgtgtttcaaccaactacaat
atcgattctaacaatcctgctgaggatgacaaggctgagacaatcctttacaacgcattg
aagaagggtggctttgttagtcaggcaagtgtacagaacttcaagaacccagatattcgt
gagggtggctctattattcagagtgcaaaggttggtccttcaatcgctaagagcattact
tataatgctatcatgagcgtattgttggctatcttcttcatcttcttgtatatcctcttg
cgtttccgtaacattggtttctctgttggttcaatcgttggtttggttctcgataccaca
atcgttatcggttgcttctcgttgtgctatggttggattggtttctcacttgagatagac
cagaccttcatcggtgctatcttgaccgtaatcggttatgatatcaacgataccgtggtt
gtttacgaccgtatccgtgagaacttgggtaagcataagcataatcttgcaaaggctgat
atccaaaagatcttcaatgattctatcaaccagaccctctcacgtactatcaatacatct
gtatcaacattaatcgtactcgtgtctatcttcatcctcggtggtgagagtatccgtagc
ttctcattcgcaatgattatcggtattattatcggtactttgagttcaatcttcattgca
tctcctgttgcttacctcgtgttgggtaagaagattgagaagcgttcacacgaacttgca
gaggcacctgttgaggcttaa
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