Prevotella melaninogenica: HMPREF0659_A6530
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Entry
HMPREF0659_A6530 CDS
T01286
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pmz
Prevotella melaninogenica
Pathway
pmz03420
Nucleotide excision repair
pmz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HMPREF0659_A6530
03430 Mismatch repair
HMPREF0659_A6530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmz03400
]
HMPREF0659_A6530
Enzymes [BR:
pmz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HMPREF0659_A6530
DNA repair and recombination proteins [BR:
pmz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HMPREF0659_A6530
MMR (mismatch excision repair)
Other MMR factors
HMPREF0659_A6530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
RNase_T
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
AAA_30
DEDDh_C
AAA_11
IPT
Motif
Other DBs
NCBI-ProteinID:
ADK96570
LinkDB
All DBs
Position
II:144856..147546
Genome browser
AA seq
896 aa
AA seq
DB search
MEANNYTPSLDKYQVPVVEASQGYHLVLASPGCGKTHILAERIRYARERGVKYEDMLCLT
FTNRAAREMTNRIQKVVGGDFSELMVGNVHRFCSKFLFEQGRIPADSAIIDDEEAVSIIA
DYRNEDEEGVTRDFNRYKGYQTIIFFQHFIYQMEHQHPWKYYLHPESFTDDDREAVKHIC
ASQKIEYDEQAVVNIYHHAQEYMDEANAPGLDGKTADRIRVLLWKMYYANCYARYKEENH
LFDFEDLLLYTYDIYRSDPTCKRYPWIQVDEVQDLNGMQLAIIDLLTAEDNPMVMYLGDE
QQAIFSFMGAKVETLTLLKMRCKGNIHHLQRNHRSPKYLLDVFNDYAEKQLKIDRELLPL
SDNDTKATSGDLRIIHSSTIEAEHKDITTEALSLYEQNKEERTAVIVSANSDADRISEAM
TEAGLTHFKVSGRDLFDTPDVKLLLAHLSVLSNEHNSIAWTRIMKGVRAFPSHALARRFN
WKLKQLALSPSDFLLYPESCYTAEFLRAYNEEEIVVFDTETTGLNVFQDDIIEIAAIRIK
GGEVVGEPLDLYIETDKPILPMLGDKENPMYAIYHEKMSTGELLSPSDALRRFLAYVGTS
PILGHNANYDYNILDNNLQRYCNDTMQAHDIRCFDSLKLIRLLAPSLHSYKLESLLETFQ
LAGVNSHQAIDDVKATVSLVRLCAEKAREKQAQQEAFIHHPKVKPFANVLRSNYGERYRE
AVNRLYQLSTDHEPALVSELSAAYNAFHSDGLINDIPRLDYILRYLRIDMLTDEPVANAL
APQLSQYIMDINTLKEADFCNSKSILERIYVTTVHKAKGLEFDNVIIFDAADGRYPNAYN
KTKQQDEEDARKFYVAMSRAKRRLFIAYALQMVDRHGRVFNRELTPLMDSIQKYFN
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atggaggcaaataattacacaccaagtttagataaatatcaagttcctgttgttgaggca
agtcagggatatcatcttgtgctggcatcaccgggatgtggtaagacacatatcctcgca
gagaggataagatacgcacgagaaaggggtgtgaagtatgaggatatgctctgtcttaca
ttcaccaaccgtgctgcaagagagatgaccaaccgtattcagaaggtggtgggaggtgat
ttctctgaactaatggtgggtaatgtgcatcgtttttgttctaagttcctttttgagcag
ggtaggatcccagctgattctgccattattgacgacgaagaggcggtgagtattatcgct
gattatcgcaatgaagatgaagaaggagtaacaagagacttcaaccgatacaaaggttat
cagacgattatcttctttcagcatttcatctatcagatggaacaccagcatccatggaag
tattacctccatccagagagtttcacggatgatgatcgagaagctgtaaagcatatctgt
gcctcacaaaagatagaatatgacgagcaggcagtagtgaatatctatcatcatgcacag
gaatatatggacgaagcgaatgcacccgggcttgacggaaagacagcagataggattcgt
gtacttctttggaagatgtattacgctaattgttatgcccgatacaaggaggagaatcac
ctctttgactttgaagacttgctcctctatacatacgatatctatcgttctgaccctacc
tgcaagcgttatccatggatacaggtcgatgaagtgcaggatcttaatggtatgcagctt
gctattatcgacttactgacagcagaagacaacccgatggtgatgtacttaggcgacgaa
cagcaggctatcttctcttttatgggggcgaaagtggagacactaaccctcttgaagatg
cgctgtaagggtaatattcatcatctgcagcgtaaccaccgttcaccaaaatatctactt
gacgtctttaatgactacgcagaaaagcaactgaagatagaccgcgaactactccctctt
tccgataatgacactaaggctacgtcgggagacttgagaatcatacatagtagtacgata
gaagccgaacacaaggatattaccactgaggcactctccctttacgagcagaataaggag
gagcgtacagccgtcatcgttagtgctaattcggatgctgatcgtatcagtgaagctatg
acggaagcagggctgacccactttaaggtgtctggtcgcgacctcttcgatacaccagat
gtcaagctattgttggctcatttgagtgtactctctaatgaacataattctattgcgtgg
acacgtatcatgaaaggggtgcgtgccttcccttctcatgcccttgctcgccgatttaat
tggaagctaaagcagttggcactgtcgccatccgactttcttctttaccccgaaagctgt
tacacagcagagtttcttcgtgcctacaacgaggaagaaattgttgtattcgatactgaa
acaacaggcttgaatgtctttcaagatgatattatagagattgctgccatccgaatcaag
ggtggggaagtggttggcgaaccgcttgacctctacatagagaccgataaaccgattcta
ccaatgctcggtgataaggagaatccgatgtatgctatctatcatgagaagatgtctact
ggcgaattactctctccctctgatgccttacgacgtttccttgcctacgttgggaccagt
cctatccttggtcataacgccaactatgattacaacatattggacaataatctgcaacgt
tactgcaatgacacgatgcaggcacatgatattcgttgcttcgactcgctcaaactgata
agactattggctccgagccttcattcttataagttggaaagcctgctcgagaccttccag
ttggcgggtgttaatagtcatcaggcaattgatgatgtgaaggcaacagtcagtcttgta
cgcctctgtgctgagaaagcacgtgagaagcaagcacaacaagaggctttcatccaccat
ccgaaggtgaaaccatttgccaatgtgctgcgtagcaattatggcgaacgctatcgagag
gctgttaaccgactttatcagctatcaaccgaccatgagccagcccttgtcagcgagctc
tccgctgcttataacgcctttcattccgatggtttaatcaatgatattccccgattagac
tatatcctccgttatctccgcatagacatgctgacggatgaaccagtagctaatgccctt
gcaccacaactctcgcagtacataatggatattaatacgctgaaggaagccgacttctgt
aacagtaagagtattcttgagcgtatctatgtgacgactgttcataaggcaaagggactg
gagtttgataatgttatcatctttgatgcagccgatggacgctacccgaacgcctataac
aagacgaaacagcaggacgaggaagacgctcgtaagttctatgttgccatgtcacgcgct
aagcgtaggctgttcatcgcctatgccctgcagatggtcgatcgccacggaagggttttc
aatcgtgaattaacgcccctaatggatagtattcaaaagtattttaattag
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