Prevotella melaninogenica: HMPREF0659_A6647
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Entry
HMPREF0659_A6647 CDS
T01286
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
pmz
Prevotella melaninogenica
Brite
KEGG Orthology (KO) [BR:
pmz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmz03016
]
HMPREF0659_A6647 (trmE)
Transfer RNA biogenesis [BR:
pmz03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
HMPREF0659_A6647 (trmE)
Prokaryotic type
Methyltransferases
HMPREF0659_A6647 (trmE)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
GTP_EFTU
MMR_HSR1_Xtn
Dynamin_N
RsgA_GTPase
ABC_tran
Roc
Ras
AIG1
AAA_15
Arf
ABC_ATPase
GCV_T
SP_0191-like
Guanylate_kin
AAA_22
GutM
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ADK97477
LinkDB
All DBs
Position
II:311684..313072
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AA seq
462 aa
AA seq
DB search
MNSKGIFLSASDTVCSLATQPGGAIGVIRVSGEKAIEVTDKVFHGVRGKHLTDAKGNTLH
YGEILDKEGKTIDDVLVSVFRAPHSYTGENSTEISCHGSAYILNQVVKALIDAGCRQAQP
GEYTQRAYVNGKMDLSQAEAVADLIAASNRATHQVALSQLKGHFSSELSLLREQLLKMTS
LLELELDFSDHEELEFADRTELKALAETIHQKIKLLTDSFETGKALKKGVPVAIVGKTNV
GKSTLLNCLLHEEKAIVSDIHGTTRDVIEDTTEIKGVTFRFIDTAGIRHTDDQIEKLGIE
RAYQKMDEAAIVLWVIDEQPTAEECAEMQRLAKGKHLIAIFNKIDSKETERKLLNDELPT
IFISAKLKQNIKALEEAIYEAADIPEISENSVIITSARHYEALTHADESILRVIEALDFG
LSGDLVSEDLRICLHQLADITGGQITPHEVLGNIFKHFCIGK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaattcaaagggtatatttttatcagcatctgatacagtgtgtagtcttgctactcag
cctggtggagctataggtgtcatccgtgtgagtggtgagaaggcgatagaagtgacggac
aaagtctttcatggtgttcgtggaaagcatttaacagatgcgaaagggaataccttgcat
tatggtgaaatccttgacaaggagggaaaaaccattgatgatgttctggttagtgtcttc
cgtgctcctcatagctatacgggtgagaatagtactgagatatcttgtcatggttctgct
tatattcttaatcaggttgtaaaggcacttatcgatgctggttgtcgtcaggctcagccg
ggagagtacacacagcgagcttatgtgaacggcaagatggatcttagtcaggcggaagct
gttgccgaccttattgctgcttctaatcgtgcaacgcatcaagtggcattgagccagttg
aagggccattttagttcagagctttcactcttgcgtgaacagcttttgaaaatgacttct
ttgttggagttagaacttgatttctctgaccatgaggaacttgaatttgctgatcgtaca
gaactaaaagctttggcagagacgattcatcaaaagataaaactcctcacagattccttt
gagacgggtaaggctttgaagaaaggtgtgcctgttgccattgttggtaagacgaatgtg
ggtaagtcgactctgttgaattgccttcttcatgaggagaaagctattgtttcagatatt
catggtacaacacgcgatgtcattgaagatacaacagaaatcaaaggtgtcacctttcgt
tttatagatacggctggtattcgtcacactgatgaccaaattgagaagttaggcattgag
cgcgcttatcaaaagatggatgaggctgccattgtcttatgggttattgatgagcagcca
acggcagaagaatgtgctgaaatgcagcgtttggcgaaaggtaagcatttgatagctatc
tttaataaaatagatagtaaagaaacagagcgaaaactgctaaatgatgaattgccaact
atctttatatcagcaaagttaaagcaaaatattaaggctttggaggaggctatttatgaa
gctgctgatatccctgagataagtgagaatagtgttatcattacttctgcgcgtcattac
gaggcattaacgcatgctgacgaatctattttacgtgtcatagaagctctcgactttgga
cttagtggtgaccttgttagtgaagacttacgcatctgtcttcatcaactcgctgatata
acaggtgggcagatcaccccacatgaagtgcttggaaatatatttaagcacttttgtatt
ggtaagtaa
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