Prevotella melaninogenica: HMPREF0659_A6818
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Entry
HMPREF0659_A6818 CDS
T01286
Symbol
gyrA
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pmz
Prevotella melaninogenica
Brite
KEGG Orthology (KO) [BR:
pmz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmz03032
]
HMPREF0659_A6818 (gyrA)
03400 DNA repair and recombination proteins [BR:
pmz03400
]
HMPREF0659_A6818 (gyrA)
Enzymes [BR:
pmz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HMPREF0659_A6818 (gyrA)
DNA replication proteins [BR:
pmz03032
]
Prokaryotic type
DNA Topoisomerases
HMPREF0659_A6818 (gyrA)
DNA repair and recombination proteins [BR:
pmz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HMPREF0659_A6818 (gyrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DUF2153
GDA1_CD39
ABC_tran_CTD
Fe-S_assembly
Motif
Other DBs
NCBI-ProteinID:
ADK96556
LinkDB
All DBs
Position
II:complement(531104..533683)
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AA seq
859 aa
AA seq
DB search
MDENQTIDQDRIMKINIEEEMKSSYIDYSMSVIVARALPDVRDGFKPVHRRILFGMRGIG
NFSNQPYKKCARVVGEVLGKYHPHGDSSVYGALVRMGQDWNMRYKLVDGQGNFGSVDGDS
AAAMRYTECRLSKMGEHVMDDIEKDTVDMVNNFDDTLREPAVMPTKIPNLLVNGGNGIAV
GMATNIPTHNLGEVIDGCCAYIDNPEISTDGLMEFIPAPDFPTGAYIYGLQGVKDAYETG
RGRVVMRAKAEIESDENHDKIVVTEIPYGVNKQQLIEYIADLVKEGKLEGISNVNDETGR
QGMRIVVDVKRDANANVILNKLFKMTALQSSFSVNCIALVAGRPRLLSLRECIKYFVEHR
HDVTIRRAQFDLKKAQERAHILEALIKACDNIDEVVRIIRASKTPSDAQRNLEKRFEFDE
LQSRAIVDMRLSQLTGLRLDQLHQEFEELMQTIKDLQEILNNPERCKEVMKEELQEVKEK
YGDVRRTEIIPDEHEFNAEDFYPNDPVVITISHLGYIKRTPLADFKEQARGGVGSKGART
REKDFTEYIYPATMHQTMLFFTRKGRCYWMKCYDIPEGDKNSKGRAIQNMLSLEPGDSVN
AFLRIQGLDDDDFLDSHYVVFATKQGIVKKTSLRAYSRPRTNGVIAININEGDEVVDVRL
TNGHNELIIADRNGRACRFDESNIRTMGRVSTGVRGMRLDEDGQDEVVGMIVVNDPVNET
VMVVSEEGYGKRSQVEDYRLTNRGGKGVKTLNITDKTGKLVAIKNVTDDNDLMIINKSGI
VIRMSVAECRVMGRATQGVRLINLAKKNDVIASVCKVMSSEMESQVEDDSREDLPNTDED
IKGEASSVDNTEVTPVDFE
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaaatcagacaattgatcaggacagaattatgaagatcaacatcgaggaggag
atgaaaagctcctacatcgactactcaatgtcggtgattgtggcacgtgccctccctgat
gttcgtgacggttttaagcctgttcaccgccgtatcctcttcggtatgcgtggtatcggt
aactttagcaaccagccttacaagaagtgtgcccgcgttgtcggtgaggtacttggtaag
tatcacccacatggtgactcttctgtttacggtgcgcttgtgcgtatgggacaggactgg
aatatgcgctacaagttggttgatggacagggtaactttggttctgtcgatggtgactct
gctgctgcgatgcgttatacggagtgccgcctctcaaagatgggtgagcacgttatggac
gatatcgagaaggatacggttgacatggtcaacaacttcgacgatacgttgcgcgaacca
gctgtaatgcctacaaagattcctaacctgcttgtaaatggtggtaatggtatcgctgtg
ggtatggcaacgaatatccctacacataatcttggcgaagttattgatggatgttgtgct
tatattgacaatccagagatttctactgatggattaatggaatttatcccagctccagac
ttcccaacaggtgcatatatttatggtcttcaaggtgttaaagatgcctatgagactggt
cgtggccgtgtcgtaatgcgtgctaaggctgagattgagagcgatgagaaccacgataag
attgttgtgacagagattccttacggagttaataagcagcaacttattgaatatattgct
gacctcgtgaaggaaggaaagttggagggtatctctaatgtcaatgacgaaacaggccgt
cagggtatgcgtatcgttgttgatgtgaagcgtgatgccaatgcaaacgtcattctgaat
aagcttttcaagatgacagcattgcagagttctttctctgtaaactgtatcgcattggta
gcgggtcgtccacgtctgttgagccttcgtgagtgcattaaatacttcgttgagcatcgt
cacgatgtcactatccgccgtgcacaatttgacttgaagaaagcacaggaacgtgcacat
atcttagaggcactgattaaggcttgcgacaatattgatgaggttgtacgtattattcgt
gccagcaagacaccttcagatgcccaaagaaaccttgagaagcgttttgaattcgatgag
cttcaatcaagagctatcgttgatatgcgtttgtcacagcttacgggtctgcgtcttgac
cagttgcatcaggagtttgaggaattgatgcaaaccatcaaggacttgcaggaaattctt
aataaccctgagcgttgtaaggaagtgatgaaagaagagttgcaggaggttaaggagaag
tatggcgatgttcgtcgtacagagattatccctgatgagcatgagtttaatgctgaggac
ttctatcctaatgaccctgttgttattactattagtcaccttggttatattaagcgcact
ccgcttgcagactttaaggagcaggctcgtggtggagtaggttctaagggtgctcgtaca
cgtgagaaggacttcaccgaatatatctatccagcaacaatgcaccagacaatgctgttc
tttactcgtaagggacgctgctactggatgaagtgttatgatatccctgagggcgataag
aactcaaagggccgtgctattcagaatatgctttcacttgagccgggtgattctgttaac
gcattcttgcgtattcagggcttggatgatgacgacttcctcgattctcactatgtagta
tttgcaacaaagcagggtatcgttaagaagacttcactccgtgcttactcacgtcctcgt
accaatggtgtgattgctattaacatcaatgagggagatgaggttgtagacgttcgtctg
acaaacggccataacgaacttatcatcgctgaccgcaatggtcgtgcttgtcgcttcgat
gagtcaaatatccgtactatggggcgtgtgtctacaggtgtacgtggtatgcgtttggac
gaagatggtcaggacgaagttgttggtatgattgttgttaatgaccctgttaacgagacg
gttatggtagtatctgaggagggttatggaaagcgctcacaggtagaggactatcgatta
actaatcgtggcggtaagggtgttaagacgctgaatatcacggataagactggtaaactt
gttgctatcaagaacgttacggatgataacgacttgatgattatcaacaagagcggtatt
gttatccgtatgtcagttgccgaatgccgtgtaatgggtcgagcaacacaaggtgtgcgc
ctaataaacctcgctaagaagaatgatgtcatcgcatctgtatgtaaggtgatgagctct
gagatggaatcacaggttgaggatgatagtcgtgaagacctcccaaacactgatgaggat
attaagggagaggcatcatcagtagataatacagaggtgacacctgttgatttcgagtaa
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