Prevotella melaninogenica: HMPREF0659_A6853
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Entry
HMPREF0659_A6853 CDS
T01286
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pmz
Prevotella melaninogenica
Pathway
pmz00521
Streptomycin biosynthesis
pmz00523
Polyketide sugar unit biosynthesis
pmz00525
Acarbose and validamycin biosynthesis
pmz00541
Biosynthesis of various nucleotide sugars
pmz01055
Biosynthesis of vancomycin group antibiotics
pmz01100
Metabolic pathways
pmz01110
Biosynthesis of secondary metabolites
pmz01250
Biosynthesis of nucleotide sugars
Module
pmz_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pmz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HMPREF0659_A6853 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HMPREF0659_A6853 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
HMPREF0659_A6853 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HMPREF0659_A6853 (rfbB)
00525 Acarbose and validamycin biosynthesis
HMPREF0659_A6853 (rfbB)
Enzymes [BR:
pmz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
HMPREF0659_A6853 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
RmlD_sub_bind
adh_short
NifZ
Motif
Other DBs
NCBI-ProteinID:
ADK97012
LinkDB
All DBs
Position
II:572608..573762
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AA seq
384 aa
AA seq
DB search
MKTYLVTGAAGFIGANYIKYLLHKKYVNEDIKVIVLDALTYAGNLGTIKDDIDNERCIFV
KGDIRDRELADKLFAEYDIDYLVNFAAESHVDRSIEDPQLFLSVNILGTQNLMDAARRAW
VTGKDEQGYPTWKEGKRYHQVSTDEVYGSLGAEGYFTEETPLCPHSPYSASKTSADHFVM
AYHDTYHMPISITRCSNNYGPYHFPEKLIPLIINNILEGKKLPVYGEGLNVRDWLYVEDH
CKAIDMVVREGRVGEVYNVGGHNEMKNIDIVKLTIKTIHDMMAEDKNLRTILKKQVKDAN
GDIDISWINEELITHVPDRLGHDARYAIDPTKIKNELGWYPETMFADGIVKTIRWNLEHQ
DWIQEVTSGDYQKYYDMMYTKKGR
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacttatttggtaactggtgctgccggttttatcggagcaaactacattaagtat
ttacttcataagaagtatgtgaatgaagatattaaggttattgtcctcgatgcacttaca
tacgcaggtaacctcggtactatcaaagatgatattgataacgagcgttgcatctttgta
aagggtgatattcgtgatcgtgaacttgccgacaaactctttgctgaatatgacattgac
tatctcgttaactttgcagcagaaagtcatgttgaccgttctattgaagatccacagttg
ttcctttctgtaaacattcttggtacacagaaccttatggatgctgcacgtcgtgcatgg
gtgacaggtaaggacgagcagggttatcctacatggaaggaaggcaagcgttatcatcag
gtatcaacagacgaggtgtatggttcattgggagcagaaggctactttacagaggagact
ccactctgcccacatagcccatattctgccagcaagacaagtgctgaccattttgtaatg
gcttatcacgacacttatcatatgcctatcagtattacacgttgttcaaataactatggt
ccttaccactttccagagaaattgattccattaattatcaataacatcctcgagggaaag
aaactcccagtatatggtgagggtttgaatgtacgcgactggttgtatgtagaggatcat
tgcaaagctattgatatggttgtacgtgaaggtcgtgtaggtgaagtttacaatgttggt
ggacataatgaaatgaaaaatatcgacatcgttaaactcacaataaagactatccatgat
atgatggcagaggataagaacctccgtactatcctcaagaagcaggtcaaagacgcaaat
ggtgacattgatattagttggataaatgaagagttaatcacacatgttccagaccgtctt
ggtcatgatgcacgttatgccattgacccaacaaagataaagaatgagttaggttggtat
cctgaaacaatgtttgctgacggtattgtaaaaactatccgttggaacttagagcatcaa
gactggattcaagaggttacttctggagattaccaaaagtactatgacatgatgtacaca
aaaaaaggaagataa
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