Prevotella melaninogenica: HMPREF0659_A6927
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Entry
HMPREF0659_A6927 CDS
T01286
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pmz
Prevotella melaninogenica
Brite
KEGG Orthology (KO) [BR:
pmz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmz03400
]
HMPREF0659_A6927 (radA)
DNA repair and recombination proteins [BR:
pmz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HMPREF0659_A6927 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
DnaB_C
DUF7125
Lon_C
AAA
AAA_22
AAA_16
AAA_14
nSTAND3
AAA_24
GvpD_P-loop
nSTAND_NTPase5
AAA_5
ABC_tran
NTPase_1
Isochorismatase
MCM
CobU
Elong_Iki1
DZR
HypA
Motif
Other DBs
NCBI-ProteinID:
ADK96748
LinkDB
All DBs
Position
II:671404..672804
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AA seq
466 aa
AA seq
DB search
MAKDKIAFVCSNCGQESPKWIGKCPNCGQWNTFKEFRIAADTGSQAARNAATTLRNAASG
GSVSALANKPQRLRDISSHDDPRIDMHDGELNRVLGGGLVPGSIVLLGGEPGIGKSTLTL
QTILHMTQRVLYVSGEESPHQIKMRAERISKNIAENIIILSETSLEHIFEHIRDVQPELV
VIDSIQTISTEDVDSSPGSITQVRECASALLRFAKTSGVPVILIGHINKEGSIAGPKILE
HIVDTVIQFEGDQHYMYRILRSIKNRFGSTSELGIYEMEQQGLREVSNPSELLLTEDHEG
LSGVAISSTIEGARPFLVETQALVSSAAYGTPQRSATGFDQRRLNMLLAVLEKRVGFKLM
QKDVFLNIAGGLRVTDMAMDLSVIAAVLSSNVDTPIEQGWCMCGEVGLSGEVRPISRIEQ
RIAEAEKLGFSHIIIPKYNLSGLTGKYNIQLHPVRKVEEALRALFG
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggacaagatagctttcgtctgcagtaattgtggacaagaaagtccaaaatgg
attggtaaatgccccaactgtgggcagtggaacacattcaaagagttccgtatcgctgct
gatacgggttcacaagctgcacgcaatgccgcaacaacattgcgcaatgcagcttctggc
ggctctgtttcggctttagcaaataagccacagcgtctccgtgacatttcatctcacgat
gacccacgcatagatatgcacgatggtgaacttaaccgtgtgttaggtggcggcttggta
ccgggtagtatcgtactacttggtggcgaacccggtattggtaagagtacgctgacactg
cagacaatactccacatgacgcaacgtgtactctatgtcagcggtgaggaaagtcctcat
cagataaagatgcgtgccgaacgtatttccaaaaatattgcagaaaacatcattatcttg
tcggaaacatccttagaacatatttttgagcatattcgtgacgtacagccagagcttgtt
gtgatagactctatccagactatctcaacagaagacgttgacagtagtcccggaagcatt
actcaagtgcgcgaatgtgcatcagcccttctacgctttgcaaagacaagtggcgttcct
gtgattctcattggacatatcaataaagagggaagcattgctggaccaaagatattagag
catattgttgacaccgtaattcagtttgaaggcgaccaacattatatgtatcgaatcctc
cgaagcattaaaaaccgatttggttctacttcagaactcggtatttacgagatggaacag
cagggacttcgtgaggttagcaacccttccgaacttctacttaccgaagatcatgaggga
ttatcgggcgttgctatctcaagtactattgaaggcgcacgtcctttcctcgttgagaca
caggcacttgtatcatcagctgcctatggaactccacagcgttcagccacaggtttcgac
caaagacgccttaacatgctcctcgctgtcttagagaagcgtgtcggttttaagctgatg
cagaaggatgtcttcctgaacattgcaggcggtttgcgtgtgacagacatggcgatggac
ctcagtgtcattgctgccgtactctcatcgaatgttgacacaccaatagaacaaggctgg
tgtatgtgtggtgaggtcggattgagtggtgaggtacgccctatcagccgtattgagcag
cgcattgcagaagctgagaaattaggttttagccatatcattattccaaagtataacctt
tcaggacttacaggtaagtacaatatacaacttcaccccgtaagaaaggttgaagaagca
cttagagcattgtttggctaa
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