Prevotella melaninogenica: HMPREF0659_A6930
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Entry
HMPREF0659_A6930 CDS
T01286
Symbol
recF
Name
(GenBank) DNA replication and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
pmz
Prevotella melaninogenica
Pathway
pmz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HMPREF0659_A6930 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmz03400
]
HMPREF0659_A6930 (recF)
DNA repair and recombination proteins [BR:
pmz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HMPREF0659_A6930 (recF)
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GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_23
AAA_21
AAA_29
AAA_27
SbcC_Walker_B
DUF2813
Motif
Other DBs
NCBI-ProteinID:
ADK97031
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Position
II:674693..675799
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AA seq
368 aa
AA seq
DB search
MQLEKLSIINYKNIQAATLNLSAKLNCFIGHNGEGKTNLLDAVYYLSFCKSAFNPKDSEV
MRHDADYFVLEGDYCTDTGEHEQVYCGMKRGSKKHFKRNKKEYKRLSQHIGLVPLIFVSP
ADATLIEGGSEERRKLMDVVISQYDTPYIESLSRYNKALQQRNSLLKQEEEPDATLLELL
EMQMAEHGEAVYKKRAAFVEELTPVFQRIYQTICSEREQVSLEYVSHCQRGDLLDVIQRD
RAKDRIMGYSLHGTHKDDLVMKLGGYPMKREGSQGQNKTYVLALKLAQFDFLRRTAGNNT
PLLLLDDIFDKLDSSRVEQIVRLVSGDDFGQIFITDTNRDHLDKILQGSGFNYKLFSVEG
GEINEREG
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgcaattagagaaactatccattataaactataagaatattcaggcggcaacattaaac
ttgtcggctaagcttaactgttttattggacataatggtgagggaaagactaatctgctt
gatgcagtctattatctttcgttctgcaagagtgcttttaatccaaaggactcagaagtg
atgcgccatgatgcagactactttgtactggaaggtgattactgtacggatactggtgag
catgaacaggtgtactgcggtatgaaacgtggctcaaagaagcattttaaacgcaataag
aaagaatataaacgactgtcacagcatatcggactggtgccattgatttttgtttctcca
gctgatgcgacccttattgaaggaggaagcgaagagcgaagaaagctgatggatgtggtt
atctcacaatacgacacaccttatatagaatcactcagccgatataataaggctttacaa
cagcgcaatagcttgctgaaacaagaggaagaaccagatgctactcttctggaactactt
gagatgcagatggcagagcatggtgaagcagtatataagaagcgagctgccttcgtagag
gaacttacccctgttttccaacgtatctatcagactatctgtagtgagcgagaacaggtg
tcactcgaatatgtttcgcattgtcaacgtggcgatttgttagacgttattcagcgtgat
cgagcaaaagaccgtattatgggctattcacttcatggcacgcataaggatgacttagtg
atgaaacttggtggctatcctatgaaacgggaaggaagtcagggacaaaataagacatac
gtattagcgctgaagcttgcacagtttgatttccttagacgcacagcaggcaataacaca
ccattattattgcttgatgacatctttgataaactcgatagtagtcgtgtggaacagata
gtacgcttggtttctggtgatgatttcggacagattttcattacagatacgaaccgtgat
cacttagataaaattctacaaggcagtggcttcaattacaagctattctctgtagaaggt
ggagaaataaacgaaagagaaggataa
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