Prevotella melaninogenica: HMPREF0659_A6938
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Entry
HMPREF0659_A6938 CDS
T01286
Name
(GenBank) AMP-binding enzyme
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pmz
Prevotella melaninogenica
Pathway
pmz00061
Fatty acid biosynthesis
pmz01100
Metabolic pathways
pmz01212
Fatty acid metabolism
pmz02024
Quorum sensing
pmz04146
Peroxisome
Module
pmz_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pmz00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
HMPREF0659_A6938
00071 Fatty acid degradation
HMPREF0659_A6938
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
HMPREF0659_A6938
09145 Cellular community - prokaryotes
02024 Quorum sensing
HMPREF0659_A6938
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pmz01004
]
HMPREF0659_A6938
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmz04147
]
HMPREF0659_A6938
Enzymes [BR:
pmz01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
HMPREF0659_A6938
Lipid biosynthesis proteins [BR:
pmz01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
HMPREF0659_A6938
Exosome [BR:
pmz04147
]
Exosomal proteins
Exosomal proteins of breast milk
HMPREF0659_A6938
Exosomal proteins of breast cancer cells
HMPREF0659_A6938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Motif
Other DBs
NCBI-ProteinID:
ADK96674
LinkDB
All DBs
Position
II:complement(684379..686043)
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AA seq
554 aa
AA seq
DB search
MDSIKSFNACIEKSIKDNWDKDALTDYLGATLQYHDVARKIEKLHILFENSGLKKGDKVA
LCGRNSSSWAVAFFATLSYGAVAVPVQHEFKPEQIYNIVNHSEAKLLFVGDVVATTIDGE
QMPQLEGIIYLPDFSLILSRSESLTNARENLNALFGKKYPKFFRAEDVNYFKDEADDLAL
INYTSGTTGFSKGVMLSYRSVRSNLAWATADLKPHIKPDSKVLCMLPMAHMYGMICEFIC
QFSFGSHLYFLTRLPSPSLIAQACTDIRPAIIIAVPMVVEKIIRKNVFPKVQSTATRMLL
KMPVVSKKVKERINAIVMEAFGGNAYELVTGGAALNKEIEDFLVSINFPVTSGYGATECG
PMVTYSDYKDFVPGSCGTPVLNMEVKIVSPDPANVPGEVITRGENVMLGYYKNEEATKEV
LDKDGWYHTGDLGTMSADGHLFLRGRIKNMLLGSNGQNVYPEEIEDKLNSMSMVSECIII
QRGDKIVGLVYPDFDEAKEMGFSQSDLQEIMEQNRLELNNMLPSFCHLSAIELRDEEFAK
TPKKSIKRYLYQEK
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggattctattaaaagtttcaacgcgtgtatagaaaagagtatcaaggataactgggat
aaagatgctctgacggattatcttggtgctacacttcaataccatgatgtagcccgcaaa
atagagaaattacatattctttttgagaatagcggtttgaagaagggtgataaggttgct
ctttgtggtagaaattcctcgtcatgggcagttgctttcttcgcaactctctcttatgga
gctgtagcagtacctgttcagcatgagtttaagccagaacagatttacaatattgttaat
cactcggaagcaaaacttctctttgttggtgatgttgtggcaacaactatcgatggagaa
cagatgcctcagttggaaggtataatatatctaccagacttctcattgattctttctcgt
tcagagtcactgacaaatgctcgtgaaaacttgaatgcactctttggaaagaagtatcca
aagttcttccgtgcggaagatgtaaattatttcaaagacgaggctgacgaccttgcactg
attaattatacaagtggaacaactggtttttcaaagggtgtgatgctcagttatcgttct
gtgcgtagtaatctcgcttgggcaacagccgatttgaaaccacatattaagcctgatagt
aaagttctttgtatgttgccaatggctcacatgtatggaatgatttgtgagtttatctgc
cagtttagctttggtagtcatctatatttccttacacgactgccgagtccttctttgatt
gctcaggcttgtactgatattcgtcctgctattattattgcagtaccaatggttgttgag
aagattattcgtaagaatgtctttccaaaggtacaaagtacagcaactcgtatgctgctg
aagatgcctgttgttagcaagaaggtgaaggaaagaattaatgcgattgttatggaagcc
tttggtggcaatgcgtatgaacttgttaccggcggagctgctcttaacaaggagatagaa
gacttcttggtaagtattaatttccctgtgaccagtggttatggagcaacggaatgtggt
ccgatggtaacttatagtgattacaaagactttgttccaggctcttgtggtacacctgtc
ttgaatatggaggtaaagattgtcagtcctgatcctgcaaatgttcctggtgaggttatt
accagaggagagaacgtgatgcttggttattacaagaatgaggaggctactaaagaagtt
cttgataaggacggttggtatcatacgggtgatcttggaacgatgagtgctgatggtcat
ctctttcttcgcggacgtataaagaatatgcttttaggttctaatggtcagaatgtctat
ccagaggaaattgaagacaagctaaactctatgtctatggtcagtgagtgtattatcatt
cagcgtggtgataagattgttggcttggtctatcctgattttgatgaggcaaaagagatg
ggcttctcacaatcagatttgcaagagataatggagcagaaccgtctggaactgaacaat
atgttgccatctttctgccacctctcggcaatagagttgcgtgatgaagagtttgcgaag
actccgaagaagagtattaagcgttatctctatcaagagaagtaa
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