KEGG   Prevotella melaninogenica: HMPREF0659_A7008
Entry
HMPREF0659_A7008  CDS       T01286                                 
Symbol
hsdR
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
pmz  Prevotella melaninogenica
Brite
KEGG Orthology (KO) [BR:pmz00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pmz02048]
    HMPREF0659_A7008 (hsdR)
Enzymes [BR:pmz01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     HMPREF0659_A7008 (hsdR)
Prokaryotic defense system [BR:pmz02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   HMPREF0659_A7008 (hsdR)
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N T1R_D3-like ResIII T1RH-like_C DEAD HSDR_N_2 Crystallin
Other DBs
NCBI-ProteinID: ADK97145
LinkDB
Position
II:785314..788514
AA seq 1066 aa
MKSFISEDDIEQTLCTRLSQPEFGWKRIECDPSVEAQDDVSKTGRRNSSECILPAVFLTA
LERLNPQIDKSILAQVVADFRKDYTGKDMMDTNYKFYNYLRNGINVKVKKNGKDDFDIVR
LIDFDNVENNDFHCVNQMWIKGRIRYRRPDVLLFVNGLPMVFIELKNSTVKIKEAYEKNL
VSYREDIPNIFALNQICVLSNGMQTKLGAWNSKYEFFFDWLKVNDEHEKLDREHIAEYGL
SIINLIDSLFRKERLLDYIENFIFFDNKRKKIIAKNHQYLGVNNLMKSVECREELKGKLG
VFWHTQGSGKSYSMVMFVRKVRRKLKGNFTFLVITDRDDLDTQIHKTFVRSEVIGEKEEC
QPKNAAQLREFLSGNKPMVFTLIHKFQYDKTKKYPLLSERNDIFVLVDEAHRTQYKQLAE
NMHTGLPNANYIAFTGTPLLGSKRLTNQWFGDYVSEYNFAQAIEDGSTVRLYYSRRVPEV
GLENNWLDSDIDKIVEEEELNDRERELLENSSSRILEVIKRDGRLDRIAQDIAHHFPRRG
FLGKGMVVSVDKYTAVKMYEKVQHYWGEEKKALIKERNAAKTQEERDELTARLDYMNKVE
MAVIISEEADEVEKFKAQGLDITVHRNKMNEITPEGKDIEDRFKDKDDPLSLVFVCAMWL
TGFDVPSLSTLYLDKPMKGHTLMQAIARANRVYPGKSCGIVVDYVNVFKYMQQALSDYAS
NGEEGAEFPAKDITQLIATIDGCIEECDSFLQGLGIRLDKIITDGDTLDKLESLRLAYDK
ILEKDESKNRFKVMSNLMMNLHDAAKPEIFELGWKNEKFSPLSYLNGLFCNRIDDEKLRR
AKEKMSYTLDDSVTVMVAEDKPQYSIHQSKVIDLSKLDIESIRKSINATPYKSMEIDNLR
TFIETALEQLINKNCTRVPFSQRYKNIIDTYNAGGTENEDYYEKLLQLIDELKKEQGRSA
DMGLREEELEIYDLLIQGRKLTKEEEKEVILASKNLYNKLVEEKERLLVVDWYKDPQPKT
KVLGLIQRSLDKDLPKTYDREVFSNKTNLLLDHFVDMAVQGYGWIS
NT seq 3201 nt   +upstreamnt  +downstreamnt
atgaaatcgtttatcagtgaagacgacatagagcagaccctttgtacccgactatcgcaa
ccagagttcggatggaagcgtattgagtgtgacccgagtgtggaggcacaagacgacgtt
agcaagacggggcgtcgcaattcgtcagagtgtatcttacctgcagtgttccttactgcc
ttagaacgacttaacccacagattgacaagagcatcttagcgcaggttgtagccgacttc
cgtaaggactatacgggtaaggacatgatggacacaaactataagttttataactatctg
cgcaatggtatcaatgtaaaggtgaagaagaatggcaaagacgactttgacatcgttcgg
ctgatagactttgataatgtagagaacaacgacttccactgtgtcaatcagatgtggata
aagggtagaattcgttatcgtcgtcccgatgtactcttgtttgtcaatggacttccaatg
gtcttcatcgaattgaagaactcaaccgtaaagataaaggaagcctatgagaagaatctc
gttagctaccgagaagatatacccaatatctttgcactaaaccagatatgcgtactctca
aatggtatgcagacgaagttgggtgcgtggaactctaagtatgaattcttcttcgactgg
ctaaaggtcaacgacgaacatgagaaactcgaccgtgagcatatagccgagtatggtctt
tcaatcatcaacctcattgacagtcttttccgcaaggaacgcttgttagactatatcgaa
aactttatcttctttgacaataagcgcaaaaagattatcgctaagaaccaccaatactta
ggcgtaaacaacctcatgaagagcgtggaatgcagagaagaactaaaaggaaagttaggt
gtgttctggcatacgcagggttcgggtaagagctattcgatggtgatgtttgtacgaaag
gtaagacgcaagctaaagggtaacttcaccttcctcgtcattaccgacagagacgacctc
gacacacagatacataagaccttcgtgcgcagtgaggtcattggcgagaaagaagagtgc
cagccaaagaatgcagcccaactacgtgagttccttagcggtaacaaaccgatggtcttt
acgctgatacataagtttcagtatgataagacaaagaaatatcccctcctctctgagcgt
aatgacatctttgtcttagtggacgaggcacatagaacacagtataagcagttggcagag
aacatgcacacgggtctgcctaatgccaactacatcgcctttacaggaacccctttgtta
ggttcaaagcgattgaccaatcaatggtttggcgactatgtatcagaatataactttgca
caagcaattgaagacggtagtacggtgcgcctgtactatagccgtcgagtgccagaggtg
ggattagagaataactggcttgactcagacattgacaagatagtcgaagaagaagaactc
aacgacagagaaagagaactcttagagaactcctcctcacgtatcttagaggtaatcaag
cgcgacggacgtcttgaccgtattgcgcaagacattgcccaccacttcccaagacgaggt
ttcttaggaaaaggtatggtggtcagtgtggataaatacacggctgtgaagatgtatgag
aaggtgcaacactactggggagaagagaagaaagccctcatcaaggagcgcaatgcagcc
aagacccaagaagaacgtgatgagctgacagcacgattagactatatgaataaggttgag
atggctgtcattatcagtgaagaagctgacgaagtagagaagttcaaggcacaaggatta
gacatcactgttcatcgcaataagatgaacgagataacaccagagggaaaagacattgaa
gacagatttaaggacaaggatgatccgctaagtttggtctttgtttgtgcgatgtggctc
acaggctttgacgtcccttcgctctcaaccctttatcttgacaagccgatgaagggacat
acactgatgcaagcgattgctcgtgccaaccgtgtgtatcccggtaagagctgcggtatc
gtggttgactatgtcaatgtatttaagtatatgcagcaggcactgtctgactatgcctca
aatggtgaggaaggtgcagagttcccagcaaaagatattacgcagctaatcgcaaccatt
gacggttgtattgaggagtgcgactcgttcttacaaggtttagggataaggttggataag
attatcaccgatggtgacacattagacaaactggagtctttgcgattggcatacgacaaa
atccttgagaaggacgagagtaaaaacaggtttaaggtgatgagtaacctcatgatgaac
ctgcatgatgcagcaaagccagagatatttgaacttggatggaagaatgagaagttctct
ccactgagttatctcaacggactgttctgtaacagaatagatgatgagaaactaagaagg
gcaaaggagaagatgagctacacactggacgatagcgttacggtgatggttgcagaagac
aagccacaatatagtattcatcagagtaaggtgattgacttgagtaaattagatatagaa
agtattcgtaagtctatcaatgcaactccttataagtcaatggagattgataacctacgc
acctttatagaaacagctttggaacagttgattaataagaactgtacgagagtgccattc
tctcaaagatacaagaatatcattgatacctataatgcaggtggtacggagaatgaggat
tactatgagaagttgttacagctgattgatgaactcaagaaagagcagggacggtcggca
gatatgggattaagggaggaagaacttgaaatctacgaccttcttatccaaggtcggaag
ctaacaaaggaggaagagaaggaagttatccttgcttctaaaaacctttataacaagttg
gtggaggaaaaagaaagattgttggtggttgactggtataaagacccacaaccaaagaca
aaggtgttgggactgatacaacggtcgctggataaggatttgccaaagacctatgatagg
gaggtgttttcgaacaagacaaacctgctgttagatcactttgtagatatggctgtacag
gggtatggttggatatcataa

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