Prevotella melaninogenica: HMPREF0659_A7041
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Entry
HMPREF0659_A7041 CDS
T01286
Name
(GenBank) RHS repeat-associated core domain protein
Organism
pmz
Prevotella melaninogenica
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
FG-GAP_3
FG-GAP
TcdB_toxin_midN
Tae4
SpvB
DUF6443
Motif
Other DBs
NCBI-ProteinID:
ADK97037
LinkDB
All DBs
Position
II:complement(825377..831448)
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AA seq
2023 aa
AA seq
DB search
MKKHLLLLIYLLVTISSLAQERLYTDKEHGGVGNGVFGKINDEINVSPTGQLSYEIPIPA
LPGTGGMKPNLSVCYNSSTKNGLAGYGFDLMGLSIISRIPSDRFHDGMATAIDFTSRDHF
ALDGQRLIKYNYSYGTETEYRTENNSFAKILANGKSTNPTSFTVYTKSGLIYDYVTVSKA
LGKAETDSTLFWLVSKVSDTKGNYFTVTYGGEASTNDFYPSRIDYTGNATVGLSPYASIR
FSYMSNPYSPVTYVNGARVKRSQLLFSIALFMGDQVVRNFQFNYQVENRKYQLSEVTETA
SGGEHKNPTQLTWTNLSDFKVKNYNYSQTKLIHKATLTVGDFNGDGLADFIATPENDRAG
WKGWKLFISHSTYFEQVASGTWNWNDDKLEQVVCGDFNGDGYADVVAKRCHSGKWHNCDL
YTTSVDNNGKISLAFSKCFISLPTDYTIQTVELNGDGVADLFAWLSNSKECKLIRSEQGA
YGITPLGYTAVRYCSEKWNKVEFGDFNGDGLTDVMNLNDNGNCIMYCDGVGTMTKEDKSS
WPNKNHYLELGDFNGDGKTDMLLTGWTKDPNRGGWSTWCINYSKGDGKFTTEYYEKPFDA
RSKQLYIADLNGDGFDDFQAIDKTSSGSNMTQPQAYLSDGRGNFYKQVKGGSVYATDRWH
FYVGDFNGDGKADFVCTSNWNKSNWDGYQVYLMPSDKHSLLTGIKDGLGNSTNIDYKYLT
DESVFTRGRTNSYPLVSIGLSWPVVASVSTPDGIGGTNVTSYRYEDALFHKNGRGLLGFA
KCYVKDETTNTLNTTEYSVNIEKYVIAPKHSQTIVNDKVIEESYLTYTLKSNYASSSYNS
SIYTYMPMTVHQKNYEFNTGELIKDVKTDYEYDTWGNTTKTIVKNGSIETTTTSTFINNT
DKWLLGRLTESIVSKSNESGTTTRKSSFEYDPNSGMLTTEVFAPGNTELGYRKTYVHDNF
GNIVKSTVSSLDGSSERITQTHYDAKGRYIVSSINSLGFLETSKYNEVEGLVTASTDKNG
IVTNYTYDKFGNLVTASTPISKALKTTGWSAGMSDAPANALYFEWNKTTGEPSSIEFYDC
LGRLLRKVTESVNGKKVYTDQTYDKKGLVERTSEPYYVGGQQYWSKNEYDVVGRTIAQTA
PDGSRHIFAYSGLKTTATDPLGSISTKISNLNGLLASSIDNAGTGITYKYDADGKCIETK
GPRTTIHCSYDIAGNRISLDDPDLGHSQDTYNAFGELIAHQDGHGETRFEYDTGGRIIQE
IRPDVTISTTYDRGWKGAVDEVVSVGSIQSSEIYTYDDYGRVVKKNTVIDDREYETEYTY
NLANQVETIKYPKGLKVKNGYDACGIQISVSNADNQKLYWKLHALDARRQIEKEEYGNGL
ITTTAHDPKKGTISSILTPGIQNWTYSFDAMGNLVTRRDLKRNLSESFSYDGLYRLTTVR
KNGQVTQSMTYDNAGNITSKSDVGTYIYTDGSNKLSSITDCKRSIAAWDEISYNSFDKVA
KIVSGDKTMLIEYGPDKSRVLVDIQGVRKYYVDNLFEQKVENGKISSTNYIFVLGKAVAI
LSQDANDIKDVKYIHHDHLGSIQAYSDELGKLYQELSYDAWGLRRNPETWVVFDVMASNN
AYNDHGFGGHEHIDLFELVNMDGRMYDPVVGRFISADPFIQSPDFTQSLNRYAYCINNPL
SLIDPSGYSWFSKNWKTITASIVGIAVSVVTAGTASGPAIAIIAGAAGGAAGALTGALLN
GANLGQIAKSTFVGAVVGGASGFLNFASGDGTIFEQLFKHTFSQAWLEGVQGGNMLHGFM
MGAVSSGGSHLINSVNLSDIEKIMANSILSGTIDEIGGGKFANGAVTGAFSILFNDLSHS
LGTRRAKKIYDEYLIGSYDGNEWIDALSLAKKIGGEVKQELTKWNAAGNDLNGCALRLSM
ALNNAGYTIPAMGKQTLKGANGMNYIVNAELMYNYLRKVYPGHIVSYTHHKKVNYGLPFI
PKRYFSNASGHVDVVFNYKWGSTGGYGYYDQQKKRDFQVSVIQ
NT seq
6072 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacatttacttcttttgatatatttattggtaacgataagcagtcttgcacag
gaacgtctttatactgataaagaacacggaggagtcggaaatggagttttcggcaaaatc
aatgatgagataaatgtttctcctacaggacaactgtcatacgaaatcccgataccagct
cttcccggaacaggtggtatgaagccgaatttatcagtatgttacaacagttccacgaaa
aatggtttggctggatatggctttgaccttatgggactatccattataagccgaattcca
tcagacaggtttcatgatgggatggccacagcaatagattttactagtcgtgatcatttt
gcattggacggtcagagattaataaaatataactattcttatggtacggaaacagaatat
agaacagaaaataattctttcgcaaaaatcttggcaaatggaaaaagtaccaaccctaca
tctttcacggtatataccaagtccggattgatatatgattatgtaaccgtatcaaaagca
ttaggtaaggcagaaacagactcaaccctgttttggcttgtgtcaaaagtatctgacaca
aaaggtaactatttcaccgtcacatatggtggtgaggctagtaccaatgatttctatcct
tcacgaattgactatacgggaaatgccacggtaggattgtctccttatgcctcaatccgt
tttagttacatgagcaatccttattcaccggttacttatgtcaatggcgcgagagttaaa
aggagccaacttcttttttctatagcactgttcatgggagaccaagtcgtgcgtaacttt
cagtttaattatcaagtcgaaaaccgcaaatatcaactttcagaagtaacagagaccgcg
tctggaggagaacataagaatccgacacaactgacgtggaccaatcttagcgattttaag
gtaaagaattacaattactcccagacaaaacttattcacaaggcgactttgactgtaggt
gatttcaatggcgatggattggcagatttcatagcaactccagagaatgacagagcaggt
tggaaaggctggaaactttttataagtcatagcacttactttgaacaggtcgcaagtggg
acatggaactggaatgacgataaacttgagcaggttgtctgtggggactttaacggtgac
ggttatgccgatgttgttgcaaaacgatgccattccggcaaatggcataactgcgactta
tacacaacatcggtggacaacaacggaaagataagtcttgctttctcgaaatgtttcatc
tcacttccaacagactatacaatccaaacagtagaattaaatggcgatggagttgccgac
ttgttcgcatggctttcgaattccaaagagtgtaaactaatccgctcagagcagggtgca
tatgggataacacctttaggttatacagcggttagatattgctccgaaaagtggaacaaa
gtggaatttggcgatttcaatggagatggactgacagatgtgatgaaccttaatgacaac
ggtaactgtatcatgtattgtgatggtgtgggaaccatgactaaggaggataaatcgtca
tggcctaataagaaccattatctggaacttggagatttcaatggagatggaaagactgac
atgctgcttactgggtggacaaaagatcccaatagaggaggatggagtacttggtgcatc
aattattcaaaaggggatggcaagtttaccacagagtattatgaaaaaccctttgatgca
cgttcaaagcaactgtatattgcggatctaaacggtgatggattcgatgacttccaggcc
atcgacaagacatcttctggaagtaatatgacgcaaccgcaggcctaccttagtgacgga
agaggcaatttttataaacaggtaaaaggtggtagtgtatatgctacagacaggtggcat
ttctatgttggcgatttcaacggtgacggaaaagctgatttcgtttgtacctctaattgg
aataaaagcaactgggatggttatcaggtttatttgatgccatctgacaaacatagtctt
ttgacgggtatcaaagacggtttgggcaattccaccaatattgattataaatatctgaca
gatgaaagtgtatttaccagaggcaggacaaattcatatcctcttgtctccataggattg
tcatggcctgtagtggcgtctgtttcaacaccagatggaattggcgggactaatgtaaca
tcttacagatatgaagatgcgttattccacaaaaatgggcgtggtttgctgggctttgca
aaatgctatgtgaaagacgagaccaccaatacactgaacactaccgaatattcggtgaac
atcgagaaatatgtgattgcgcccaagcatagccagaccattgtcaacgacaaggtgatt
gaggagagctaccttacatatacacttaaatcaaactatgcttcgtcgtcctataattct
agcatctatacctatatgccgatgacggttcatcagaagaactacgagtttaacaccggt
gaactaatcaaggatgtaaagacagactatgagtatgacacttgggggaataccacaaaa
accattgttaagaatggaagcattgagacaaccaccaccagtactttcatcaataatact
gacaaatggcttttaggcagactaacggaaagtattgtttccaaatccaatgagagtggt
acaacaactcggaagtcctcattcgaatatgatccgaattccggcatgctgaccacagaa
gtgtttgccccgggaaataccgaattgggctatagaaaaacatacgtccacgacaacttt
ggaaacattgttaaaagtactgtttcttctcttgatggctcatcagaaaggattactcaa
acccactatgatgccaagggtagatatatcgtatcctctatcaacagtttaggatttctt
gaaacatcgaaatacaatgaggtggagggacttgttaccgcttcaacggataagaacggc
attgttaccaattacacttacgataaattcggtaatcttgttacagcatctacccctatc
tcaaaagcattgaaaactacggggtggagtgccggaatgtctgatgcaccagcgaacgca
ttgtattttgaatggaacaagactacaggagagccttcttccatcgagttctacgactgt
ttaggacgtctgttgagaaaagttacggagtcggttaacgggaagaaggtctacacagac
cagacttatgataagaaggggcttgtcgaaaggacttctgagccatattatgtcggcgga
caacagtattggagcaagaatgaatacgatgtagtgggcaggacgattgcgcaaacagcc
cctgatggaagccgccacatcttcgcatatagtggacttaagactacggcaacggaccca
cttggaagcatcagtacaaaaattagcaatcttaacggcttgctggcttctagtattgac
aatgctggcacaggtattacttacaaatatgatgcggatggaaagtgcatagaaactaag
gggccaaggacgaccatccactgttcctatgacatagcaggaaaccgaataagtttggat
gatccggatttagggcattcccaggacacatacaatgcgtttggagagctcatagcccat
caagatggtcacggggagacccgatttgaatatgacactggtggacgtattatacaggaa
atcagaccggatgtaacaatttcaactacgtatgacagaggatggaaaggtgctgttgac
gaagtcgtttctgtcggttccatacagtcgtcagagatatatacttatgatgattacgga
agagttgtcaagaaaaatactgtcatagatgacagggagtatgagacggagtatacatac
aatttggcaaatcaggttgagaccataaaatatcccaaaggactgaaagtaaagaatggg
tatgatgcctgcggaatacagatatcagtttcaaatgccgacaaccagaaactctattgg
aagctccatgccctggatgcaaggagacagattgagaaggaagaatacggaaacggcctc
atcacaacaacggctcatgatccaaagaaaggtactatctccagcatattgacacccgga
attcaaaattggacatacagttttgatgccatgggcaatcttgtcacacgccgtgattta
aagagaaatctatcggaatccttctcgtatgatggtttgtatcgtctgacaacagttcgt
aagaacggtcaggtaacacagtccatgacttatgacaacgctggcaatataaccagcaag
tctgatgtcggaacatatatctatacagacggttccaacaagttgtcttccattacggat
tgcaagcgttccattgcggcttgggatgaaatcagctataactctttcgacaaagttgcc
aagattgtatcaggcgataaaacaatgctgatagaatatggtccagacaaatcgagagta
ttggtagacattcagggagtgcggaaatattatgtggataatctgtttgagcagaaagtt
gaaaatggtaagataagcagcacgaactatatctttgtgttgggaaaggctgtggcaata
ctctcacaggatgctaatgacattaaagatgtaaaatacatacatcatgaccacttaggc
tccattcaggcttattccgatgaactcggcaaactgtatcaggaactaagctatgatgca
tggggattaagacgtaacccagagacatgggtagtatttgatgtgatggcatcaaacaat
gcttataatgatcatggcttcggcggacatgagcatattgacttgtttgaactggtcaat
atggacggtagaatgtatgaccctgtcgtagggcgttttatttccgcagacccgtttata
cagagtccggactttacacaaagtctgaaccgctatgcgtattgtataaacaaccctctt
tccctgatagatccatctggatatagttggttcagcaaaaactggaaaacaattactgcg
tctatagttggtatagcagtttctgtagtaactgcaggtacagcgagtggacctgctatt
gccataattgcaggggctgcaggaggtgctgctggcgctttgacgggtgccctacttaac
ggggcgaatcttggtcaaatagcaaaaagcacctttgtcggagccgtagttggtggcgca
agtggttttttgaattttgcgtcaggcgatggtactatattcgagcaattgtttaaacat
acgttttcacaagcttggctagaaggtgtacaaggaggtaatatgctccacggttttatg
atgggagctgtatctagtggtggaagtcatcttataaattcagtaaacttatctgacata
gaaaaaattatggctaattctatattaagtgggacgattgatgaaattggtgggggaaaa
tttgccaatggtgcagttacaggtgcattctccattttatttaatgatttgtctcattca
cttggaactagaagggcaaagaaaatatatgatgaatatttaattggatcatatgatggt
aatgaatggatagacgcactttctcttgcgaagaaaataggaggagaagttaaacaggaa
ttaactaaatggaatgctgctggtaatgatctaaatggatgcgctttacgcttaagcatg
gcattaaacaatgcaggttatacaattcctgcaatgggaaagcagaccctaaagggtgca
aatggaatgaattatattgtaaatgcggaattgatgtataattatttaaggaaagtatat
ccaggccatatcgtgtcatatacacatcataaaaaagtaaattacggcttgcctttcatc
cccaaaagatatttcagtaatgcttctggccatgtagatgtagtttttaattataaatgg
ggatcaacaggaggttatggatattacgaccaacaaaagaaaagagattttcaagtttct
gtaatacaataa
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