Polaromonas naphthalenivorans: Pnap_0138
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Entry
Pnap_0138 CDS
T00459
Name
(GenBank) DNA replication and repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pna
Polaromonas naphthalenivorans
Brite
KEGG Orthology (KO) [BR:
pna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pna03400
]
Pnap_0138
DNA repair and recombination proteins [BR:
pna03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Pnap_0138
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DUF7125
AAA_22
ChlI
AAA_16
DnaB_C
Lon_C
RecA_N
GvpD_P-loop
NTPase_1
nSTAND3
SLFN-g3_helicase
nSTAND_NTPase5
AAA_30
NPHP3_N
AAA_14
AAA_24
AAA_5
AAA_29
zinc_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
ABM35463
UniProt:
A1VII5
LinkDB
All DBs
Position
149206..150633
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AA seq
475 aa
AA seq
DB search
MQPGCPMMRSGQYTSRMAKEKTIYTCTECGGTSPRWLGKCPHCTAWNTLIESSAENPAAG
KNRYSPQFQSLAKACEVTALADIEATDMTRTPTGHEELDRVLGGGIVEGGVVLIGGDPGI
GKSTLLLQALDSLQRAGLNTLYVTGEESGAQVALRSRRLGLDGSQVKVMAEIQLDKILAT
LEVTQPAVAVIDSIQTVYSDQLTSAPGSVAQVRECAAHLTRAAKSSGVCIVLVGHVTKDG
ALAGPRVLEHMVDTVLYFEGDTHSSFRLVRAIKNRFGAVNEIGVFAMTEKGLKGVSNPSA
MFLSQHSEPVPGSCVMVTLEGTRPLLVEIQALVDDGGPNPRRLSVGLDRDRLAMLLAVLH
RHAGVACMDQDVFVNAVGGVRISEPAADLAVMLAIASSLRGKALPKGFLAFGEVGLAGEV
RPAPRGQERLKEAAKLGFSVAVVPKANAPKKPIEGLTIHAVERIEQALDLVRSLQ
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgcagccgggctgcccaatgatgcgaagcggtcaatacactagccgcatggccaaagaa
aaaacgatttacacctgcaccgaatgcggcggcaccagcccccggtggctgggcaaatgc
ccgcattgcactgcctggaacacactgatcgaatccagcgccgaaaaccccgccgctgga
aaaaaccgctacagcccgcagttccagtctctggccaaggcctgcgaagtcaccgcgctg
gccgacatcgaggccaccgacatgacgcgcaccccgaccggccacgaggaactcgaccgg
gtgctgggcggcggcattgtcgaaggcggcgtggtgctgatcggcggcgacccgggcatc
ggcaaatcgacgctgctcttgcaggcgctcgactcgctgcagcgcgccgggctgaacacg
ctgtatgtgaccggcgaggaaagcggcgcgcaggtcgcgctgcgctcgcgccggctgggg
ctggacggttcgcaggtcaaggtgatggccgaaatccagctcgacaagattctcgccacg
ctggaggtcacgcagccggcggtcgccgtcatcgactcgatccagacggtgtattcggac
cagctgacctcggcgcccggctcggtggcgcaggtgcgcgaatgcgcggcgcatttgacg
cgcgcggccaagtccagcggcgtgtgcatcgtgctggtcggccacgtcaccaaggacggc
gcgctggccggcccgcgcgtgctggaacacatggtcgataccgtgctgtatttcgagggc
gacacgcattcgagctttcgcctcgtgcgcgccatcaagaaccgctttggcgcggtcaac
gaaatcggcgtcttcgccatgaccgaaaaaggcctgaagggcgtgagcaacccgagcgcg
atgttcctgagccagcacagcgagccggtgccgggcagctgcgtgatggtcacgctcgaa
ggcacgcggccgctgctggtcgagatccaggcgctggtcgatgacggcggcccgaacccg
cgccgcctgagcgtcggcctggaccgcgaccggctggcgatgctgctggccgtgctgcac
cgccatgcgggcgtggcctgcatggaccaggacgtgttcgtcaacgccgtcggcggcgtg
cgcatcagcgaaccggcggccgacctggcggtgatgctggcgattgcgtcgagcctgcgc
ggcaaggccttgcccaagggctttctggcctttggcgaggtcggcctggccggagaagtg
cggcccgcgccgcgcggccaggagcggctgaaggaagcggccaagctgggtttcagcgtg
gcggtggtgcccaaggccaacgcgccgaaaaagccgattgaaggcctgaccatccacgcc
gtcgagcgcatcgagcaggcgctggacctggtgcgcagcctgcagtag
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