Polaromonas naphthalenivorans: Pnap_0176
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Entry
Pnap_0176 CDS
T00459
Name
(GenBank) cell elongation-specific peptidoglycan D,D-transpeptidase
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pna
Polaromonas naphthalenivorans
Pathway
pna00550
Peptidoglycan biosynthesis
pna01100
Metabolic pathways
pna01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pna00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Pnap_0176
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Pnap_0176
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pna01011
]
Pnap_0176
Enzymes [BR:
pna01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Pnap_0176
Peptidoglycan biosynthesis and degradation proteins [BR:
pna01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
Pnap_0176
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Wzy_C_2
Motif
Other DBs
NCBI-ProteinID:
ABM35501
UniProt:
A1VIM3
LinkDB
All DBs
Position
187285..189336
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AA seq
683 aa
AA seq
DB search
MTELRNVEADLSRFRTRVLVAGLVVFLCFSLVASRLVYLQVYRHEDLRAQAESNRTAIVP
IVPNRGLILDRNGIVLASNYSAYTLEITPSKVENLDETIAALEKLVDIQPRDKRRFKRLR
EESKSFESIPLRTRLSDEEVARFAARRFAFPGVDIKARLFRSYPYGELGSHVVGYIGRIN
QLEKDAIEEREEEGNYRGTDYIGKLGVEQSFEQQLHGQTGVEQMETSAGGRALRKLATSP
ATPGNTVMLSLDIGLQKLVEDMFGTRRGALVALDPRNGEVLAFVSKPTFDPNLFVDGIDQ
ESWQALNESIDKPLLNRALRGTYPPGSTYKPFMALAALQTGTRSPGAIIHDPGFYMFGGH
RFGSPENERGGAMDMNRAIVESSNVYFYSLANELGVDAIHDFMAPLGFGQLTGIDINGEV
RGVLPSQAWKRGYFKRVEQQKWFAGETISLGIGQGYNSFTMLQLAQATATLANNGLRHKP
RLVMGTQDTVTRALHPLPADPPVDLGYKPENVAIVRKALVGVTQGGTSTKVFAGAQYLSG
GKTGTAQAVTIGQKDKYNKSRMEEHQRDHAVYMAFAPADNPKIALAVIVENAGWGAGVAA
PIARRVFDYVLMGQYPSEEDMLAVQAGRAAAPIGKPRLAAEMNALLVDDTPGGSPSAAPQ
KAEPPAVAARTRPFSRQNRPRPP
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgactgaactcagaaatgttgaagccgacctgtcacgctttcgcacccgtgtgctggtg
gccggcctggtggtgtttctctgcttttcgctggtggcgtcgcggctggtgtatttgcag
gtctatcgccacgaagacctgcgcgcgcaggccgagagcaaccgcacggcgattgtcccc
atcgttcccaatcgcggcctgatcctggaccgcaacggcatcgtgctggcgtccaactac
tcggcctacacgctggaaatcaccccgtccaaggtcgagaacctggacgaaaccatcgcc
gcgctggaaaagctggtcgatatccagccccgcgacaagcggcgcttcaagcgcctgcgc
gaggagtcgaaaagcttcgagtcgatcccgttgcgcacgcgcctctccgacgaggaagtg
gcgcgcttcgcggcccggcgctttgcctttccgggcgtggacatcaaggcccggctgttt
cgcagctatccctacggcgagctgggcagccatgtggtgggctacatcggccgcatcaac
cagctagagaaagacgccatcgaggagcgcgaggaagaaggcaattaccggggcaccgac
tacatcggcaagctcggcgtcgagcagagcttcgagcagcagctgcacggccagaccggc
gtcgagcagatggaaacctcggccggcgggcgcgcgctgcgcaagctcgccaccagcccg
gccacgcccggcaacaccgtcatgctgtcgctggacatcggcctgcaaaaactggtcgag
gacatgttcggcacgcggcgcggcgcgctggtggcgctggacccgagaaacggcgaggtg
ctggccttcgtcagcaagccgaccttcgacccgaacctgttcgtcgatggcatcgaccag
gaaagctggcaggcgctcaacgagtccatcgacaagccgttgctgaaccgggcgctgcgc
ggaacctacccgccgggctcgacctacaagcccttcatggccctggccgcgctgcagacc
ggcacgcgttcgccgggcgccatcatccacgacccgggcttttacatgtttggcggccac
cgcttcggtagccccgagaacgagcgcggcggcgccatggacatgaaccgcgcgattgtc
gagtcgagcaacgtgtatttttattcgctggccaatgaactcggcgtcgatgcgattcac
gacttcatggcgccgctgggttttggccagctcaccggcatcgacatcaacggcgaagtg
cgcggcgtgctgcccagccaggcctggaaacgcggctatttcaagcgcgtcgagcagcag
aagtggtttgccggcgaaaccatctcgctgggcatcggccagggctacaacagcttcacc
atgctgcagctggcgcaggcaacggccacgctggccaacaacgggctcaggcacaagccg
cgcctggtgatgggcacgcaggacacggtgacgcgcgccctgcacccgctgcccgccgac
ccgccggtcgatctgggctacaagcccgagaacgtggccatcgtccgcaaggcgctggtc
ggggtgacgcagggcggcacctcgaccaaggtgtttgccggcgcgcagtacctgtccggc
ggcaagaccggcacggcccaggcggtgacgataggccagaaggacaagtacaacaagtcc
cggatggaagagcaccagcgcgaccatgcggtttacatggcgtttgcgccggccgacaac
cccaaaatcgcgctggcggtgattgttgaaaacgccggctggggcgctggcgtggccgca
ccgattgcccgcagggtgttcgactatgtcctgatgggccagtacccgagcgaagaagac
atgctcgcggtgcaggccggacgggctgccgcgccgattggcaagccgcgcctggccgcc
gagatgaatgcgctgctggtggacgatacgcccggcggttcgccatctgccgcgcctcaa
aaagccgagcccccagccgtggcggcaaggacaaggcccttcagccggcaaaaccggcca
aggccgccgtaa
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