Polaromonas naphthalenivorans: Pnap_0197
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Entry
Pnap_0197 CDS
T00459
Name
(GenBank) penicillin-binding protein 6, Serine peptidase, MEROPS family S11
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
pna
Polaromonas naphthalenivorans
Pathway
pna00550
Peptidoglycan biosynthesis
pna01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pna00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Pnap_0197
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pna01002
]
Pnap_0197
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pna01011
]
Pnap_0197
Enzymes [BR:
pna01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Pnap_0197
Peptidases and inhibitors [BR:
pna01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
Pnap_0197
Peptidoglycan biosynthesis and degradation proteins [BR:
pna01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
Pnap_0197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
ABM35522
UniProt:
A1VIP4
LinkDB
All DBs
Position
208232..209440
Genome browser
AA seq
402 aa
AA seq
DB search
MQCFLKAPAGLRGLAATFVLLVSVALPAAHAQAPQVPEIAARSYLLLDVTANQILAAKDI
DSPVEPASLTKLMTEYLVFDALKSKKITLQQTFGVSQRAWKMPGSRMFIDPKMQVPVEDL
IKGMIVQSGNDATMALAEGVGGTAEHFVELMNQQAKALGMKSTSYKNPEGLTEAGHITTA
RDLSILSTRLMSDFPDYIGYSAIKKYRYPGTPATNDTNRNTLLFRDPTVDGLKTGHTNAA
GYCMIATAKREFPNLGAAGKPGGRRLLAIVLGTTSDSARATESQKLLNWGYTAFEAVKLF
DAGQAVVTPAVWKGKDAVVKLGRPEAIVVAVTAGSASRLKTQVARPEPLVAPFKKGQPVG
SLKIMLGDNPAPMAEVPLVALETVEEAGIMGRAWDSIRLWIK
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgcaatgcttcctcaaggcccccgccggcctgcgcggcctcgccgccactttcgtcctg
cttgtctcggtggcgcttcccgccgcgcatgcccaggcaccgcaggtgcctgaaatcgcc
gcacgctcctatctgctgctcgacgtcacggccaaccagatcctggccgccaaggacatc
gattctccggtcgagccggcgtcgctgaccaagctgatgaccgaatacctggtgttcgat
gcgctcaagtccaagaagatcacgctccagcagaccttcggcgtcagccagcgcgcctgg
aaaatgccgggttcgcgcatgttcatcgacccgaaaatgcaggttccggtcgaagacttg
atcaagggcatgatcgtgcagtcgggcaacgacgccaccatggcgctggccgagggcgtg
ggcggaacggccgagcatttcgtggagctgatgaaccagcaggccaaggcgctgggcatg
aaatcgaccagctacaaaaaccccgaaggcctgaccgaagccggccacatcaccacggcg
cgcgacctgagcattttgtccacccgcctgatgagcgacttccctgattacatcggctac
tcggccatcaagaagtaccgctaccccggcacgccagccaccaacgacaccaaccgcaac
acgctgctgtttcgcgacccgacggtcgatggcctgaaaaccggccacaccaacgctgcc
ggctattgcatgattgccacggccaagcgcgaatttcccaatctgggcgcagccggcaag
cccggcggcaggcgcctgctggccatcgtgctgggaaccaccagcgacagcgcccgcgcg
accgagtcgcaaaaactgctgaactggggttacaccgccttcgaagcggtcaagctgttc
gatgccggccaggcggtggtgacgcctgcggtctggaaaggcaaggacgcggtcgtcaag
ctgggtcgtcccgaagcgatcgtggtggctgtgacggccggcagcgcctccaggctcaaa
acccaggtggcccggcccgagccgctggtcgcgcccttcaagaagggccagccggtgggc
agcctgaagatcatgctgggcgacaaccccgcgcccatggccgaagtgccgctggtggcg
ctggaaaccgtcgaagaagccggcatcatgggccgcgcctgggattcgatccggctgtgg
atcaagtaa
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