Polaromonas naphthalenivorans: Pnap_0389
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Entry
Pnap_0389 CDS
T00459
Name
(GenBank) thermosome subunit
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pna
Polaromonas naphthalenivorans
Pathway
pna03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Pnap_0389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pna03019
]
Pnap_0389
03110 Chaperones and folding catalysts [BR:
pna03110
]
Pnap_0389
03029 Mitochondrial biogenesis [BR:
pna03029
]
Pnap_0389
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pna04147
]
Pnap_0389
Enzymes [BR:
pna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Pnap_0389
Messenger RNA biogenesis [BR:
pna03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Pnap_0389
Chaperones and folding catalysts [BR:
pna03110
]
Heat shock proteins
HSP60 / Chaperonin
Pnap_0389
Mitochondrial biogenesis [BR:
pna03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Pnap_0389
Exosome [BR:
pna04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Pnap_0389
Exosomal proteins of other body fluids (saliva and urine)
Pnap_0389
Exosomal proteins of breast cancer cells
Pnap_0389
Exosomal proteins of colorectal cancer cells
Pnap_0389
Exosomal proteins of bladder cancer cells
Pnap_0389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ABM35712
UniProt:
A1VJ84
LinkDB
All DBs
Position
385951..387585
Genome browser
AA seq
544 aa
AA seq
DB search
MKPKQLIFHDAARGKIWRGVEALAEAVKVTLGPRGRTVILERDFGPPQIVNSGVLVAKSI
ELEDRFENMGAQLLREVAARTSEMAGDGTTTATVLAHGMIQEGLRYLAGGMNPMDLKRGI
ELAIDTVVAELQRMAKPCASSQEIAHVAAISANNDRSIGDLLASAIDKVGREGAISIEDG
SGLVSVLEVVEGMQFDRGFLSPYFINNAERQSAVLEDVSILLCEGRLTSLNDLLPLLEEV
VKAGRPLLVIAEDVDSDSLAALVINTMRGTLKTCAVKAPGFGDRRKAMVQDIAVLTGGTV
VSDEVGLTLGKVRLQDLGRATRAEITKESTTLIGGAGKPQAIRDRIATIRKERELAASDY
DREKLDERAAKLSGGVALIKVGAATETELKERKLRVEDALHATRAAVEEGIVPGGGVALL
RARRTLAGLTGGTLDETSGIRLVSRALEEPLRRIVSNAGDEPSVILNRVDESPDPAFGYN
AATRAYGDLLQMGVIDPAKVTRLALQNAASIASLILTTDCMIATAPKPSSEEGALNPEGS
SPMF
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgaaacccaaacaactcatttttcacgacgctgccaggggaaaaatctggcgcggggtg
gaggcgctggccgaagccgtgaaggtcacgctggggccgcgcgggcgaaccgtgatcctg
gagcgcgacttcggcccgccgcagatcgtcaactccggcgtgctggtggccaagtcgata
gagcttgaggacaggtttgaaaacatgggtgcgcagctgctgcgcgaagtggcggcccgc
accagcgagatggcgggcgacggcaccaccaccgccacggtgctggcccacggcatgatc
caggaggggctgcgctatctggccggcggcatgaatccgatggacctcaagcgcggcatt
gaactggccatcgacacggtggtggccgaactccagcgcatggccaagccctgcgccagc
tcccaggaaatcgcgcatgtggcggcgatatcggccaacaacgaccgctccatcggcgac
ctgctggccagcgccatcgacaaggtggggcgtgaaggcgcgatttccatcgaggacggc
tccgggctggtcagcgtgctggaagtggtcgaaggcatgcagttcgaccggggtttcctg
tcgccgtacttcatcaacaatgcagagcggcaaagcgccgtgctcgaagacgtgtccatc
ttgctgtgtgaaggccggctgacttcgctcaatgacctgttgcctttgctggaggaagtc
gtcaaggccggccgcccgctgctggtgattgccgaggacgtggacagcgactcgctggcg
gcgctggtgatcaacacgatgcgcggcaccctgaaaacctgcgccgtcaaggcgccggga
ttcggcgacaggcgcaaggcgatggtgcaggacattgcggtgctgacgggcggcacggtc
gtcagcgacgaggtcgggttgacgctgggcaaggtcaggctgcaggatctggggcgcgcc
acccgcgccgagatcaccaaggaaagcaccaccctgatcggtggcgcgggcaagccgcag
gcgatcagggacaggattgccaccatccgcaaggagcgcgaactggccgccagcgactac
gaccgcgaaaagctcgacgagcgcgcggccaagctgtcgggcggcgtcgccctgatcaag
gtcggcgcggccacagagaccgagttgaaggagcgcaagctgcgcgttgaagacgccctg
catgccacgcgcgcggcggtggaagagggcatcgttccgggtggcggcgtggccttgttg
cgggcgcgccgcaccctggcggggctgaccggcggcacgctcgatgaaacgtccggtatt
cggctggtgtcgcgcgcgctggaagagcccttgcgccgcatcgtgagcaatgcgggcgac
gagccttcggtgattctcaaccgggttgacgaatcgccggacccggcatttggctacaac
gcggccacgcgcgcctatggcgacctgctgcagatgggggtcatcgacccggccaaggtc
acgcggctggcgctgcaaaatgccgcctccattgccagcctgattctcaccaccgactgc
atgattgccacggcgcccaagccgtcatccgaagagggcgcgctgaatccggaaggcagc
tcgcccatgttttga
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integrated database retrieval system
