Polaromonas naphthalenivorans: Pnap_0481
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Entry
Pnap_0481 CDS
T00459
Name
(GenBank) Exonuclease, RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pna
Polaromonas naphthalenivorans
Pathway
pna03030
DNA replication
pna03430
Mismatch repair
pna03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Pnap_0481
03430 Mismatch repair
Pnap_0481
03440 Homologous recombination
Pnap_0481
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pna03032
]
Pnap_0481
03400 DNA repair and recombination proteins [BR:
pna03400
]
Pnap_0481
Enzymes [BR:
pna01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Pnap_0481
DNA replication proteins [BR:
pna03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Pnap_0481
DNA repair and recombination proteins [BR:
pna03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Pnap_0481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
ABM35803
UniProt:
A1VJH5
LinkDB
All DBs
Position
502623..503285
Genome browser
AA seq
220 aa
AA seq
DB search
MSVFAGLPPSRWFAALKREWLLYHLGDPRFRFMWDPAPENEWVALDCETTGLNTRTDDII
AIGAVRIRDNRIMTSERLELLVRPEKRRLSAESVRVHRLREQDVAQGISADEAMMKLMYF
IGSRPLVGYYLEFDLAMINRVLFPMLGMGLPQPKIEVSSMYYDYKFHQLPHHARDSGSID
LRFESLMKDLNLPLWSAHDALNDAIMAALAFLKLRQLRAG
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgtctttgccggcctgccgccgagccgctggttcgcggcgctcaagcgcgaatgg
ctgctctaccacctgggcgacccgcgctttcgcttcatgtgggacccggcgcccgagaac
gaatgggtggcgctggactgcgaaaccaccgggctgaacacccggaccgacgacatcatc
gccattggcgcggtgcgcatccgggacaaccgcatcatgaccagcgagcgcctggagttg
ctggtgcggcccgagaagcggcgcttgagcgccgaaagcgtgcgcgtgcatcgcctgcgc
gagcaggatgtggcgcaaggcatcagcgccgacgaggcgatgatgaagctgatgtatttc
atcggcagccggccgctggtgggctactacctggagtttgacctggccatgatcaaccgg
gtgctgttcccgatgctcggcatgggcctgccccagcccaagatcgaagtgtcgtcgatg
tactacgactacaagttccaccagttgccgcaccatgcgcgcgacagcggctcgattgac
ctgcgctttgaaagcctcatgaaagacctgaacctgccgctctggtcggcccacgacgcg
ctgaacgacgccatcatggcggcgctggcttttttgaagctgcggcagttgcgggcgggg
tga
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