KEGG   Polaromonas naphthalenivorans: Pnap_0820
Entry
Pnap_0820         CDS       T00459                                 
Name
(GenBank) PHP C-terminal domain protein
  KO
K02347  DNA polymerase (family X)
Organism
pna  Polaromonas naphthalenivorans
Brite
KEGG Orthology (KO) [BR:pna00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pna03400]
    Pnap_0820
DNA repair and recombination proteins [BR:pna03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerase
    Pnap_0820
SSDB
Motif
Pfam: DNA_pol_B_thumb HHH_8 HHH_5 HHH PHP DNA_pol_B_palm DNA_pol_lambd_f RNase_P_p30
Other DBs
NCBI-ProteinID: ABM36139
UniProt: A1VKG1
LinkDB
Position
865711..867438
AA seq 575 aa
MPIQNAEIAAVLNEIADLLDIQEANPFRIRAYRNAARTVGEAGRSVPAMVARQADLDALP
GIGPDLAGKITEIVNTGSCALLERLRKELPPGITELLKVPGLGPKRVRALYHDLGVQTLA
QLHLAAQEGRVQAIAGFGPKTQQALLEATAARLRQERRFPLGVADETAAALLAGLAAVPG
VARAVAAGSLRRRRETVGDLDLLVSLSGDSAVMAHFIQGEDGRQVLLHGGTRASVVLKSG
LQVDLRAVPAQSLGAAWVYFTGSKAHNIALRRLAQEQGLKVNEYGVFRGAERIAGATEAS
LYQALGLRYIEPELREDRGEIEAARQDRLPVLVSLADLRGDLHLHTRDSDGRDSLEAMAA
AARARGWRYAAVTDHSRSPAFARGLDPVRLAKQIDRIDRFNEKAQGFTVLKGIEVDILQD
GTLELPDSILQRLDLVVGAVHHHLDLPRARQTERVLRAMDSRYFTLLAHPTGRLIGERAP
CEIDLLRVLRKARERGCFVELNAQPARLDLADTACQMAKAEGVLVSINSDAHGTLEFNHL
PSGIDQGRRGWLEKADVLNTRDLPELRPLLARTMG
NT seq 1728 nt   +upstreamnt  +downstreamnt
atgccaatccagaatgccgaaattgccgcggtgctgaatgaaatcgccgacctgctcgac
attcaggaggcgaacccctttcgcattcgcgcctaccgcaatgccgcgcgcacggtgggc
gaggccggccgcagcgtgccggccatggtggcgcgccaggccgacctggatgcgctgccg
ggcatcgggccggacctggcaggcaagatcaccgagatcgtcaacaccggcagttgcgcc
ctgctggagcgcttgcgcaaggaactgccgccgggcatcaccgaattgctgaaagtgccc
gggctggggcccaagcgcgtcagggcgctgtaccacgaccttggcgtgcagacgctggcg
caactgcatcttgccgcccaggagggccgggtgcaggccatcgccggctttgggccgaag
acgcagcaggcgctgctggaggcgacggcggcgcggctgaggcaagagcgccgttttccg
ctcggcgtggctgacgaaacggcggcagcgctgctggccggccttgcggcggtgcccggc
gttgcgcgcgcggtggccgccggcagcctgcggcggcggcgtgagacggtcggcgatctg
gacctgctggtcagcctgagcggcgacagcgcggtgatggcgcactttattcagggcgaa
gatgggcgccaggtgctgcttcacggcggcacccgcgccagcgtggtgctcaaaagcggc
ctgcaggtggacctgcgcgcggtgccggcgcaaagcttgggcgccgcctgggtgtacttc
accggctcgaaggcgcacaacatcgcgctgcggcggctggcgcaggagcagggcctgaag
gtcaatgaatacggcgtgttccggggcgctgaacgcatcgccggcgccaccgaggcgtcg
ctctaccaggcgctcgggctgcgctacatcgagcccgaactgcgcgaggaccggggcgaa
atcgaggcggcgcgccaggaccggctgccggtgctggtgagcctggccgacttgcgcggc
gacctgcacctgcatacccgcgacagcgacggccgggacagcctggaggccatggcggcg
gcggcccgggcgcgcggctggcgctatgcggccgtcaccgaccactcgcgcagcccggcc
tttgcgcgcggcctggacccggtgcggctggccaagcagatcgaccgcatcgaccgcttc
aacgaaaaggcccagggcttcaccgtgctcaagggcatcgaggtcgatatcctgcaggac
ggcacgctcgaactgccggactcgatcctgcagcggctggacctggtggtgggcgccgtg
caccaccacctggacctgccgcgcgcccggcagaccgagcgcgtgctgcgcgccatggac
agccgctatttcacgctgcttgcgcacccgacggggcgcctgatcggcgagcgcgcgccc
tgcgagatcgacctgctgcgggtgctgcgcaaggcccgggagcgcggctgtttcgtcgag
ctcaatgcccagcccgcgcggctcgacctggccgacaccgcctgccagatggccaaggcc
gaaggcgtgctggtcagcatcaactccgacgcgcacggcacgctggaattcaaccacctg
ccatcgggcatcgaccaggggcgccgtggctggctcgaaaaggccgatgtgctgaacacg
cgcgacttgccggagctgcggccgctgctggcgcgcacgatggggtaa

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