Polaromonas naphthalenivorans: Pnap_1478
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Entry
Pnap_1478 CDS
T00459
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pna
Polaromonas naphthalenivorans
Pathway
pna03030
DNA replication
pna03410
Base excision repair
pna03420
Nucleotide excision repair
pna03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Pnap_1478
03410 Base excision repair
Pnap_1478
03420 Nucleotide excision repair
Pnap_1478
03440 Homologous recombination
Pnap_1478
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pna03032
]
Pnap_1478
03400 DNA repair and recombination proteins [BR:
pna03400
]
Pnap_1478
Enzymes [BR:
pna01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Pnap_1478
DNA replication proteins [BR:
pna03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Pnap_1478
DNA repair and recombination proteins [BR:
pna03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Pnap_1478
NER (nucleotide excision repair)
GGR (global genome repair) factors
Pnap_1478
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
ABM36792
UniProt:
A1VMB4
LinkDB
All DBs
Position
1566249..1569074
Genome browser
AA seq
941 aa
AA seq
DB search
MSPDKKTLLLVDGSSYLYRAFHAMPDLRVTPGDPQSPATGAIRGMVNMMQKLRKDVRADY
AVCVFDAKGPTFRDALYPEYKAQRSAMPDDLRSQVEPIHEVVQLLGWKVLAVPGVEADDV
IGTLACMASSQQIEVIISSGDKDLSQLVDEHITVIDTMNDRRRDLAGVEAEFGVPPRLMV
DYQTLVGDTVDNVPGVPKVGPKTAVKWLLEYGSLDALVARAGEIKGIVGENLRKSLDWLP
KGRELLTIKKDCELADYIDGLPAMDSIAIGAQQTSALRTFYLKYGFKGLVGQIDAENTPP
ELVGGPERRKPRAPTASPDSPGLFDDDEPSLLDTPLAGRASNLLYETILTWEALDRWLAK
IEAAELVAVDTETTSLDEMRAQIVGVSFSVTPGEAAYIPLTHDYPSAPEQLPLDEVLARL
KPWLENPARPKLGQNIKYDRHVFANHGIEVQGYAHDTMLQSYVLEVTKPHGLASLAERHV
GRSGINYEDLCGKGVHQIKFNQVDIARAAEYSCEDSDQTLDVHRVLWPQLQANEKLLFIY
QLEMQSSETLYRIERNGVLIDAPMLARQSHELGQRLLQLETEAYEMAGQPFNLGSPKQLA
EIFFDKLGMKVVKKTPSGARSTDEDVLEKLAEDHPLPAKLLEHRSLSKLKGTYTDKLAQL
ANPRTGRVHTHYAQAVAVTGRLSSNDPNLQNIPVKTAEGRRVREAFVAPAGSVIASADYS
QIELRIMAHISGDESLLHAFTAGLDVHRATAAEVFGVALEQVSSEQRRYAKVINFGLIYG
MSSFGLAKNLGIETKAAAAYIDRYFQRYPGVKHYMDSTRQLAKEQGYVETVFGRRLLLPE
INSPNGPRRAGAERAAINAPMQGTAADLIKLSMVKVQQVLDAEKRGTKMIMQVHDELVFE
VPEAEVEWVRTEIPRLMAGVAELKVPLLAEIGFGPNWEQAH
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgagtcctgataaaaaaaccttgctgctggtcgatggctccagctacctgtaccgcgcc
tttcatgccatgcccgacctgcgcgtcacccccggcgacccgcaaagcccggccaccggc
gcgattcgcggcatggtcaacatgatgcaaaaactgcgcaaggatgtgcgggccgactat
gcggtctgcgtgttcgacgccaaggggccgacctttcgcgatgcgctgtatcccgagtac
aaggcccagcgctcggccatgcccgacgatctgcgcagccaggtcgagccgattcatgaa
gtggtgcaactgctgggctggaaagtgctcgccgtgcccggcgtcgaggccgacgacgtg
atcggcacgctggcctgcatggcctcaagccagcaaatcgaagtcatcatctccagcggc
gacaaggacttgagccagctggtcgatgaacacatcaccgtcatcgacaccatgaatgac
cgtcgccgcgacctggctggtgttgaagcggaattcggcgtgccgccgcgcctgatggtc
gattaccagacgctggtcggcgacactgttgacaacgtgccgggcgtgcccaaggtgggc
ccgaaaaccgccgtgaagtggctgctcgaatatggctcgctcgatgcgctggtggcccgg
gctggcgagatcaagggcatcgtcggcgagaacctgcgcaagtcgctggactggctgccc
aagggccgcgagctgctgacgatcaagaaagactgcgaactggccgactacatcgacggc
ttgcctgctatggattcaatagctatcggcgcacagcagacgagcgcattgaggactttt
tatctgaaatatggcttcaagggactggtcggccagattgatgccgaaaatacgccgccc
gaacttgtcggcggccctgaacgccgcaagccccgcgcgccgacggcctcgccagattcg
cccggcctgttcgacgacgacgagccttcgctgcttgacacgccgctggccgggcgcgcc
agcaacctgctgtatgaaactatcctgacctgggaggcgctggaccgctggctggccaaa
atcgaagcggccgaactggtggcagtcgataccgaaaccacgtcgctcgatgaaatgcgc
gcgcagattgtcggcgtgagcttcagcgtgacgccgggcgaggccgcctacattccgctg
acgcacgactaccctagcgcccccgagcagttgccgctggatgaggtgctggcccggctc
aagccctggcttgaaaacccggccagaccgaagctgggccagaacatcaaatacgaccgc
catgtgttcgccaaccacggcatcgaggtgcagggctacgcgcacgacaccatgctgcaa
agctatgtgctcgaagtgaccaagccgcacgggctggccagcctggccgagcggcatgtg
gggcgcagcggcatcaactatgaagacctgtgcggcaagggcgtacaccagatcaagttc
aaccaggtcgatattgccagggcagccgaatactcgtgcgaagactccgaccagacgctt
gacgtgcaccgggtgctgtggccgcaactgcaggccaatgaaaagctgctgtttatctat
cagctggaaatgcagagcagcgaaacgctctaccgcatcgagcgcaacggcgtgctgatc
gacgcgcccatgctggccaggcaaagccatgaactgggccagcgcctgctgcagctggag
accgaggcgtacgagatggccggccagcccttcaacctgggcagccccaagcaattggcc
gaaatattctttgacaagctgggcatgaaggtggtcaagaaaacgcccagcggcgcgcgc
agcaccgacgaggatgtgcttgaaaagctggccgaagatcacccgctgccggccaagctg
ctggaacaccgctcgctttccaagctcaagggcacctacaccgacaagctggcccaactg
gccaacccgcgcaccggccgcgtccacacccactatgcgcaggccgtcgccgtgaccggc
cggctgtcgagcaacgaccccaacctgcagaacatcccggtcaagaccgccgagggccgg
cgcgtgcgcgaagccttcgtggcgcctgccggcagcgtgatcgccagcgccgactattcg
cagatcgagctgcgcatcatggcgcacatcagcggcgatgaatcgttgctgcatgccttc
accgccgggctggacgtgcaccgcgccacggcagccgaagtgttcggcgtcgcgctggag
caggtcagcagcgaacagcgccgctacgccaaggtcatcaacttcggcctgatctacggc
atgagcagttttggcctggcgaagaacctggggattgaaaccaaggcggcggccgcctac
atcgaccgctatttccagcgctatcccggcgtgaagcactacatggattcgacccgccaa
ctggccaaggagcagggctacgtcgagaccgtcttcggccggcgcctgctgttgcccgaa
atcaactcgcccaacggcccgcgccgcgccggcgccgagcgcgccgccatcaacgcgccc
atgcagggcaccgccgccgacctgatcaagctcagcatggtgaaggtgcagcaagtactg
gatgccgaaaagcgcggcacgaaaatgatcatgcaggtgcatgacgaactggtgtttgaa
gtccccgaggccgaggtggaatgggtgcgcaccgagattccgcgcctcatggccggcgtg
gccgagctcaaggtgccgctgctggccgagatcggctttgggccgaactgggaacaggcg
cactga
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