Polaromonas naphthalenivorans: Pnap_1663
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Entry
Pnap_1663 CDS
T00459
Name
(GenBank) conserved hypothetical protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pna
Polaromonas naphthalenivorans
Brite
KEGG Orthology (KO) [BR:
pna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pna03400
]
Pnap_1663
DNA repair and recombination proteins [BR:
pna03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Pnap_1663
Archaeal homologous recombinant proteins
Pnap_1663
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_27
AAA_23
SMC_N
AAA_15
AAA_29
AAA_21
Motif
Other DBs
NCBI-ProteinID:
ABM36977
UniProt:
A1VMU9
LinkDB
All DBs
Position
1758649..1762254
Genome browser
AA seq
1201 aa
AA seq
DB search
MKIRTLFLKAFGPFTDTTLDFSGPAGLHLIYGANEAGKSSALRAITDLRYGIPMRSKDDF
VHEFKNMRVAGCFEDVAGRAVGLARRKGMNDTLMGADPLTGMQLPGGVVSPEVLLALTGG
VAREQFETMYGLNSQHLRKGGQLLIQGEGELGAALFEASTGSAGIKQMLQTLQEDAKKYF
NPRSKAPILNDALRQLDEAKQRYRLAITKPDQWKTLKREHEAAELHLATVRRDLAGQRRR
QAELAELRAVEPLLQQLALNEQGWAQVQGHVALPEDARELRLAALQQQAQARQALLEAQA
ALAECRAGLQALRIEPLLLTHAPAIDRLAADLALARHGRDERLKLQAQADSEAGQLLLQA
AQIMGGGQSPDSLEAFFQRAPSAADQAELARLLDEAKSLTLALQHAQERLDAAERKLALH
RRELLEAPALPLQQALAMALAQAQLLGDAPQRLAEQQAALGAEQRRLAQALADLGLDSAA
QLTASRWLASAEIDTYEQVRRDWQQQAALSQSDLKKLQTDLAAQQLRHKSLSATGEVVTA
ETLRQARAVRDAGWQTVRSAFIDRPAAAAEPVTESPGHQPQSLAADLPHAFERAQTQADR
QADLLREGATRAAEVAECEQRIAEMTQAQAEHQRARAEQAQALAVLDENWRGTLARLGLP
HGTAALVREWQALRQSALERHERLTVVAQDHARLAQQISAATQPLLTALGALGALGALGA
LGALGLAAPDEAAPLQVLMKLGADADRRLLAQQAAIAQRTSDMASLAQDIEDAQASVAEL
TALRQGCQRTLDDKARLLYLGQGAAAETLKARLAELQHWVQDYQRHAEHLGQVRAMQDSE
NAALDAAGALGQLVQEPVWEHQSAWLDALALRLAQTREAVQLKAAGERSEAEELRRQQRA
QADLQSAAQALAQLVAQAGAQDADALPEAETRSEQRRTAAARLHDLQEQLAQTSPKNAAT
LRAELAGLDRVAIDGEKQACAAAIARLEADEQAAIDAEQAARIALAQIDTSDAAAQAREE
MEAAIARYRAGVRPWAQLKLAQALLGEALRRHREKAQGPVVALAGEYFRLMTGGRFVRLR
VDEDHDAPVLLAESAQGQRMEVAALSEGTADQLYLALRLAALEVQRKPDRMMPLVLDDVL
MTADDERAASMFSALAKFATAGQVLVFTHHHHLLQVACGALGHDGLRVHRLEAAFERHPA
P
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatccgcaccctgtttttaaaagccttcggcccgttcaccgacaccacgctggat
ttttccggcccggccggcctgcacctgatttacggcgccaacgaggcgggcaagtcctcg
gcgctgcgcgccatcaccgatctgcgctatggcattccgatgcgcagcaaggacgatttt
gtccacgagttcaagaacatgcgcgtggccggctgcttcgaggatgtggcgggccgcgcc
gtcggactggcccggcgcaagggcatgaacgacacgctgatgggcgccgacccgctcacc
ggcatgcagttgccgggcggcgtggtctcgcccgaggtgctgctggcgctgaccggcggc
gtggcgcgcgagcagttcgaaaccatgtacgggctcaattcccagcatctgcgcaagggc
gggcaactcctgattcagggcgaaggcgagctgggcgcggcgctgttcgaggccagcacc
ggctcggcgggcatcaagcagatgctgcaaaccctgcaggaagacgccaaaaaatacttc
aacccacgcagcaaggcgccgattctcaatgacgcgctgcgccagctcgacgaggccaag
cagcgctaccggctggcaatcaccaagcccgatcaatggaaaaccttgaagcgcgagcat
gaagcggccgagctgcatctggccactgtcagacgcgatctggccgggcagcggcggcgc
caggccgaactggccgagctgcgcgccgtcgagccgctgctgcagcaactggcgctcaac
gagcagggctgggcgcaagtccagggccatgtggcgctgcccgaagacgccagagagttg
cggctggccgcgctgcagcagcaggcccaggcgcgccaggcgctgcttgaggcccaggcc
gcgctggccgaatgccgggcgggcttgcaggcgcttcggatcgagccgctgctgctgacg
catgcgccagcgattgaccggctggccgctgatctggcgctggcccggcacgggcgcgac
gagcgcctcaagctgcaagcgcaagctgattccgaggccggccagctgttgctgcaggcc
gcgcaaatcatgggcggcggccagagcccggacagcctggaggcgtttttccagcgtgcc
ccttcagcggcggaccaggccgaactggcgcgcctgctcgatgaagccaaaagcctgacg
ctggcgctgcagcatgcgcaggagcggctggacgcggccgagcgcaagctggcgctgcac
cggcgcgaactgctcgaagcgcccgcgctgcccttgcagcaggcgctggccatggcgctg
gcgcaggcgcaactgctgggcgatgcgccccagcggctggccgagcagcaggccgcgcta
ggcgccgagcagcgccggctggcgcaggcgctggccgatctggggctggactccgcggcg
caactgacggcctcgcgctggctggcttcggccgagattgacacttacgagcaggtgcgc
cgcgactggcagcagcaggcggcactgagccagagcgacttgaagaagctgcagacggac
ctggccgcgcagcagctgcgccacaagagcctgtcggccaccggcgaagtcgtcaccgcc
gagaccctgcgccaggccagagccgtgcgcgatgcgggctggcagacggttcgcagcgcg
ttcatcgaccggccggcggcggcagccgagccagtaacggagtcgcccggccatcagccg
caatctctggcggccgacctgccgcacgccttcgagcgcgcgcagacgcaggccgaccgg
caggccgacctgctgcgcgaaggcgcgacgcgggccgctgaagtggccgagtgcgaacag
cgcatcgccgaaatgacgcaggcgcaggccgaacaccagcgcgcccgcgctgaacaggcg
caggcgctggccgtgctcgatgagaactggcgcggcacgctggcgcgactgggccttcca
cacggaacggcggcgctggtgcgcgaatggcaggcgctgcgccagagtgcgctggagcgc
cacgagcgcctcaccgtcgttgcgcaagaccatgcccggctggcgcaacaaatcagcgcc
gccacgcagccgctgctgacggcgctgggcgcgctgggcgcgctgggcgcgctgggcgcg
ctgggcgcgctggggctggccgcgccggatgaggctgcgcccttgcaggttttgatgaag
ctgggcgccgacgccgaccgccgcctgctggcgcagcaggccgccatcgcgcagcgcacc
agcgacatggccagcctggcgcaggacatcgaggacgcgcaagccagcgtggccgaactg
acggcgctgcgccagggttgccagcgcacgctggacgacaaggcacgacttctttacctg
ggccagggcgccgccgccgagaccctcaaggcgcggctggccgaattgcagcactgggtg
caggactaccagcgccatgccgagcacctcgggcaggtcagggcgatgcaggacagcgaa
aacgccgccctcgacgctgctggcgcgctgggccaactggtgcaggagccggtgtgggaa
caccagtcggcctggctcgatgcgctggccttgcggctggcgcaaacgcgcgaggccgtg
cagctgaaggccgccggggagcgcagcgaagccgaagaactccggcgccagcagcgtgcg
caggccgatctgcaaagcgccgcgcaggcgcttgcgcaactggtggcgcaggccggcgca
caagacgccgacgcgctgcccgaagccgaaacccgctcggagcagcggcgcacggcagcg
gcgcggctgcacgatctgcaggagcaactggcccaaacctcgcccaagaacgccgccacg
ctgcgcgccgaactggccggcctggaccgcgtggcgattgacggcgaaaagcaggcctgc
gcggcagctattgcgcggctggaggccgatgagcaagccgccatcgacgccgagcaggcc
gcccgcatcgcgctggcgcagatcgacacctcggacgccgccgcccaggccagagaggaa
atggaggcggcgattgcccgctaccgcgctggcgtgcggccgtgggcgcagctcaagctg
gcgcaggccctgctcggcgaagccctgcggcgtcaccgcgaaaaggcgcaaggcccggtg
gtggcgctggcgggcgagtatttccggctgatgaccggcgggcgctttgtgcgcctgcgg
gtggacgaggaccacgacgccccggtgctgctggccgagtccgcgcagggccagcgcatg
gaagtcgccgccctgagcgaaggcacggccgaccagctttatctggcgctgcgcctggcc
gcgctggaggtgcagcgcaaacccgaccgcatgatgccgctggtgctggacgacgtgctt
atgaccgccgatgacgaacgcgccgccagcatgttcagcgcgctggcaaaattcgccact
gcgggccaggtgctggtgttcacgcaccaccatcatttgctgcaggtggcgtgcggcgcg
ctggggcatgacgggctgcgggttcaccggcttgaggccgccttcgagcgccatcccgcg
ccatga
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