Polaromonas naphthalenivorans: Pnap_1997
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Entry
Pnap_1997 CDS
T00459
Name
(GenBank) CMP/dCMP deaminase, zinc-binding protein
KO
K01563
haloalkane dehalogenase [EC:
3.8.1.5
]
K11991
tRNA(adenine34) deaminase [EC:
3.5.4.33
]
Organism
pna
Polaromonas naphthalenivorans
Pathway
pna00361
Chlorocyclohexane and chlorobenzene degradation
pna00625
Chloroalkane and chloroalkene degradation
pna01100
Metabolic pathways
pna01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
pna00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00625 Chloroalkane and chloroalkene degradation
Pnap_1997
00361 Chlorocyclohexane and chlorobenzene degradation
Pnap_1997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pna03016
]
Pnap_1997
Enzymes [BR:
pna01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.33 tRNA(adenine34) deaminase
Pnap_1997
3.8 Acting on halide bonds
3.8.1 In carbon-halide compounds
3.8.1.5 haloalkane dehalogenase
Pnap_1997
Transfer RNA biogenesis [BR:
pna03016
]
Prokaryotic type
tRNA modification factors
Deaminases
Pnap_1997
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MafB19-deam
dCMP_cyt_deam_1
Abhydrolase_1
Abhydrolase_6
Bd3614-deam
Hydrolase_4
APOBEC_N
Motif
Other DBs
NCBI-ProteinID:
ABM37306
UniProt:
A1VNS8
LinkDB
All DBs
Position
complement(2122054..2123289)
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AA seq
411 aa
AA seq
DB search
MSDEAFMEMALVQARVAAAFGEVPVGAVVVRQGKVIATGRNAPVEAHDPTAHAEIMALRA
AALALGNYRLDECELFVTLEPCAMCSGAMLNARLKRVVFGASEPKTGAAGSVINLFAQAR
LNHQTELQGGVLAESSRALLQDFFRQRRADQREAARQRHPLRDDALRTPDAAFDGLSAYP
WAPRYLSDLPALDGLRMHYLDEQALGVEEGGGPRLTYLCLHGSPDWSYAFRRLIPSLLQT
GHRVVAPDLIGFGKSDKPKKDSFHTFSRHRQILLELVEKLDLQNIVLVLPRQGTLLGLTL
PLAAPLRYRGLRLMNPDPLAESEYLPLSQGFLLWEQAGGMPAGTETDVACEAPFPGNSYR
AGVRAFAAMAPDSGNHDGIASEAGQFWRDRRDECNLHVSFLEKYTNKPYQE
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgaagcctttatggagatggcccttgtgcaagcccgggtagcggctgctttc
ggggaagttccggtgggtgcagtggtcgtccggcagggcaaggtgattgccactggccgc
aacgcaccggttgaggcccatgatccgacggcccatgccgagatcatggccttgcgcgcc
gcagcgctggccttgggcaactaccgtcttgacgagtgcgaactgtttgtcacgctggag
ccctgtgccatgtgcagcggcgccatgctcaacgcccggctcaaacgcgtggtgtttggg
gcgtctgaacccaaaactggagctgccggctcggtcatcaacctgtttgcgcaagcgcgg
ctgaaccaccagaccgaattgcagggcggggtgctggccgaatctagccgcgcattgctg
caggacttttttcgccagcgccgtgctgaccagcgcgaggcggcccggcagcgtcatccg
ctgcgcgatgatgcgcttcgaacccctgacgcggcttttgacggcttgagcgcttatcca
tgggcgccgcgttacctgagcgatctgccggcccttgacggcttgcggatgcattatctt
gatgaacaggcgcttggcgtggaggagggcggcgggccgcgcctgacctacctttgcctg
catggcagcccggactggagctatgcttttcgccggctgatcccgtccttgctgcagact
ggtcaccgggtggttgcgccggacctgattggttttggcaaaagcgacaagcccaagaag
gacagttttcataccttcagccggcatcgccagatactgcttgagctggtggaaaagctg
gatctgcagaacatcgtgctggtgctgcccagacagggcactttgcttggattgaccttg
cccctggctgcgccgctgcgctaccgaggattgcggctcatgaaccccgatccattggca
gagagtgaatacctgccgctaagccaggggtttttgctgtgggagcaagcaggcggcatg
ccggcaggtactgaaaccgatgtcgcttgtgaagcgccatttcccggcaacagctaccgc
gccggagtgcgtgcgtttgctgccatggcaccagattccggaaatcacgacggcattgca
tctgaagccgggcagttctggcgtgatcgccgcgatgaatgtaatttacacgttagtttt
ttagaaaaatatacgaacaaaccgtatcaagaatag
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