Polaromonas naphthalenivorans: Pnap_2009
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Entry
Pnap_2009 CDS
T00459
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pna
Polaromonas naphthalenivorans
Brite
KEGG Orthology (KO) [BR:
pna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pna03016
]
Pnap_2009
Enzymes [BR:
pna01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Pnap_2009
Transfer RNA biogenesis [BR:
pna03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Pnap_2009
Prokaryotic type
Pnap_2009
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ABM37318
UniProt:
A1VNU0
LinkDB
All DBs
Position
complement(2133526..2134569)
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AA seq
347 aa
AA seq
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MTPKSSPRQKIQRRPVHGVLLLDKPLGLSSNQALQKAKWLLRADKAGHTGTLDPLATGVL
PLCFGAATKFSQLQLDADKTYEALLLLGQKTSTADAEGEVIETRPVPEITPELLASLTQR
FTGPLAQVPPMYSALKKDGKALYEYARKGIEVEREARHITIFKLNMVLAHDPRAKVAIKI
IVSCSKGTYIRTLGEDIGEALGCGAHLGSLRRIETGGFTAAQCVTLAALEAMTEAEREAC
LLPPQSLVAAYPSVTLDADNAGRFLSGLRRRGQWGDDAPLVQVYGREPAAFLGSAHITAD
ELIPQRLLSPVEVQDILLQSARRAAEVLTSVSMAAASEPTDAGSFQH
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgaccccaaaatcttctccccgccagaaaatccagcgacgtcccgttcacggcgtgctg
ctgctcgacaagccgctgggcctgtcgagcaaccaggcgctgcaaaaagccaaatggctg
ctgcgggccgacaaggctggtcataccggcacgctcgatccgctggccaccggcgtgttg
ccgctgtgctttggcgcggccaccaagttcagccagttgcagctggacgccgacaagacc
tacgaggcgctgctgctgctgggccagaaaaccagcacggccgacgccgaaggcgaggtg
attgaaacccggcccgtgccggagatcacgcccgaactgctggcgtccctcactcagcgc
tttaccggcccgctggcgcaggttccgccgatgtattccgcgctgaagaaagacggcaag
gccttgtatgaatacgcccgcaagggcatcgaggttgagcgggaagcccgccatatcacg
attttcaagctaaatatggttcttgcgcacgacccacgggcgaaagtagctattaaaatc
atagtaagctgcagcaagggaacctacatccgcacgctcggtgaagacatcggcgaggct
ctgggctgcggcgcgcacctgggttccttgcgccggatcgaaaccggcgggttcacggcg
gcgcaatgcgtgacgctggcggcgctcgaagccatgactgaggctgaacgcgaagcctgt
ttgctgccgccccagtcgctggtggccgcttacccgtctgtcacattggatgctgataat
gcagggcgctttttgagcggtctgcggcgccggggccagtggggcgatgacgcgccgctg
gtgcaggtctatggccgcgaaccggcggcatttttaggctcggcccatatcacggccgac
gaactgattccccagcgcttgctgagtccggttgaagtccaggacatcctcctgcaatcg
gcccggcgcgctgctgaagttttaacgtcagtttccatggccgcagcctccgaacccacg
gatgccggctcttttcaacattaa
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