Polaromonas naphthalenivorans: Pnap_2818
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Entry
Pnap_2818 CDS
T00459
Name
(GenBank) putative exonuclease, RdgC
KO
K03554
recombination associated protein RdgC
Organism
pna
Polaromonas naphthalenivorans
Brite
KEGG Orthology (KO) [BR:
pna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pna03400
]
Pnap_2818
DNA repair and recombination proteins [BR:
pna03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Pnap_2818
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RdgC
DUF4140
Motif
Other DBs
NCBI-ProteinID:
ABM38120
UniProt:
A1VR42
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All DBs
Position
2960751..2961806
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AA seq
351 aa
AA seq
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MDSLPGIFAVTSLFTRTPKNRKSMFKSASFFRIATDFVLPPLDALEEALQSAQFMPCGAT
QAESVGWVPPRGNKSTVMVETVGTQVILRLSIERRPLPASAVKAEVEERVEKYKQETGRE
RVSAKIKKEFKEEAIQSLLPRAFTKRSSTTLWIDPVNKFLVVDSGSLTGADKVVSQLIEA
LSEIPGTRPGLMAKPVQTTMAAGAAMAHWLASREAPVSFTVDRDCELKMPDDQKSTVRYS
RHTLEIDEVAEHIASGKVPTQLAMTWNERVSFVLTDMAQIKKIKLLDVVLDGVQENGKDD
DGFDADAAIVTGELSDLIPDLLEALGGELSMDGTSPPTVAGPSPERQLAAA
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggactccttgccgggcattttcgccgtcacttcccttttcacccgaaccccaaaaaat
cggaaatccatgttcaaatccgcctcctttttccgcattgccaccgactttgtccttccg
cctctggacgccctggaagaagcactccagtcggcccagttcatgccctgcggcgccacg
caagccgagtctgtcggctgggttcctcctcgcggcaacaaaagcaccgtgatggtggaa
accgtcggtacgcaggtcattttgcggctgagcatcgagcgccgccccctgcccgcttcg
gccgtcaaggccgaggtggaggaacgggtcgaaaaatacaagcaggaaaccggccgcgaa
cgcgtcagcgccaagatcaaaaaagagttcaaggaagaagccatccagagcctgttgccg
cgcgccttcaccaagcgctcatccaccacgctgtggattgacccggtcaacaaatttctg
gtggttgactccggcagcctgaccggcgccgacaaggtggtcagccagttgattgaagcc
ctgagcgaaatccccggcacccgcccgggcctcatggccaaaccggtgcagaccacgatg
gccgccggcgccgccatggcgcactggctggccagccgcgaagccccagtcagcttcacg
gtggaccgcgactgcgaactcaagatgcccgacgaccagaaatcgaccgtccgctattcg
cgccacacgcttgagatcgacgaagtggcggaacatatcgcatcgggaaaagtacccacc
caactggcgatgacgtggaatgagcgtgtctcgttcgtgctgaccgacatggcccagata
aagaaaatcaagctgctcgacgtggtgcttgatggcgtgcaggaaaacggcaaggatgac
gacggctttgacgccgacgcggccatcgtgacgggcgagctatcggacctgattcctgac
ctgcttgaagccctgggcggcgagctttcaatggatggaacgtctcccccgacagtagcc
ggaccatctccagagcgccaactcgctgctgcgtag
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