Polaromonas naphthalenivorans: Pnap_3061
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Entry
Pnap_3061 CDS
T00459
Name
(GenBank) RNAse III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pna
Polaromonas naphthalenivorans
Brite
KEGG Orthology (KO) [BR:
pna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pna03019
]
Pnap_3061
03009 Ribosome biogenesis [BR:
pna03009
]
Pnap_3061
03036 Chromosome and associated proteins [BR:
pna03036
]
Pnap_3061
Enzymes [BR:
pna01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
Pnap_3061
Messenger RNA biogenesis [BR:
pna03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Pnap_3061
Ribosome biogenesis [BR:
pna03009
]
Eukaryotic type
90S particles
RNase
Pnap_3061
Prokaryotic type
rRNA processing factors
Pnap_3061
Chromosome and associated proteins [BR:
pna03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
Pnap_3061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
Lzipper-MIP1
Motif
Other DBs
NCBI-ProteinID:
ABM38360
UniProt:
A1VRT2
LinkDB
All DBs
Position
complement(3234050..3234751)
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AA seq
233 aa
AA seq
DB search
MRSTPSSSPALQALQKRLQHEFAKPKLLVQALTHRSFSSDHNERIEFLGDSVLNLAVAGL
LYEQLSELPEGDLSRVRANLVKQDTLHQLAVVLGLPDLLRLGEGEARSGGKNRPSMLADA
LEAVIGAVYLDAGYDQADQLVRRLFKDVQVNPQMKAIGKDPKTELQEWLQGRKMRLPLYK
VVSTMGAAHQQTFEVECEIAEFGRAERGIGVSRRAGEQAAATAMLLFVKTLAS
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
gtgcgctccacccccagttccagccccgcactgcaggccttgcaaaagcgcctgcagcat
gagtttgccaagccaaaacttcttgtccaggcgctgacgcaccgcagtttctcaagcgat
cacaatgaacgcatcgaatttctgggcgactccgtcctgaacctggcggttgccggactg
ttgtatgagcagttgagcgagttgcccgaaggcgatctttcgcgcgtgcgcgccaatctc
gtcaagcaagatacgctgcaccaactggccgtggtcctgggcttgcccgacctgctgcgg
ctgggcgagggcgaagcccggtctggcggaaaaaaccggccttcgatgctggccgatgcg
ctggaagcggtgattggcgcggtgtatctggatgcgggctatgaccaggccgaccagctg
gtgcgccgcctgttcaaggatgtgcaggtcaacccgcaaatgaaggccatcggcaaagac
cccaaaaccgaattgcaggagtggctgcaggggcgcaaaatgcgtcttcccctctacaag
gttgtcagcaccatgggcgccgcacaccagcagacttttgaggtcgagtgcgaaatagcc
gaatttggccgcgctgaacgcggcattggcgtctcgcgccgtgccggcgagcaggccgct
gcaacggccatgctgctgtttgtcaagacactggcttcctga
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