Polaromonas naphthalenivorans: Pnap_3349
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Entry
Pnap_3349 CDS
T00459
Name
(GenBank) deoxyribodipyrimidine photo-lyase type I
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pna
Polaromonas naphthalenivorans
Brite
KEGG Orthology (KO) [BR:
pna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pna03400
]
Pnap_3349
Enzymes [BR:
pna01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Pnap_3349
DNA repair and recombination proteins [BR:
pna03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Pnap_3349
Prokaryotic type
Pnap_3349
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ABM38646
UniProt:
A1VSL8
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All DBs
Position
3543643..3545076
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AA seq
477 aa
AA seq
DB search
MWFRRDLRLQDNAALHHALKSCEQVFCAFVFDRAILDSLPKADRRVEFIRESLVDLNRQL
AKLALPAGLLIRHGTALDALPALASRLSVDAVFANHDDEPCSLARDAEVQGLLECAGVAF
HTFKDHVIFERQEVLTLAGQPYTVFTPYKKAWLKKVDAFYLQPYPVEKYASALAARPADE
RQDVPALAELGFEKTNLSALRLPTGSQGAEALFDDFLDRMPHYADTRDFPAVKGPSYLGV
HLRFGTISIRKITLNALAQQQTGSEGAATWLSELIWRDFYAQILANFPHAASSAFKPGYD
AIAWEQGEKAELLFQAWCEGRTGYPLVDAAMAQLNQTGYMHNRLRMVTASFLVKDLGIDW
RWGERYFAEKLNDFDLASNNGGWQWAASTGCDAQPYFRIFNPVSQSEKFDADGKFIRKYL
PVLAKLPKAALHSPWLASPMERAAASVALGSNYARPVVAHAEARALTLQRYALVKKS
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgtggttcaggcgggatctgcggctccaggacaatgcagcgctgcaccatgcgctgaaa
tcgtgtgagcaggtgttttgcgccttcgtttttgaccgggccattctggattcgctgcca
aaagccgaccgtcgggtcgagttcatccgggaatccctggtggacctgaaccgtcaattg
gcaaaactggccttgcctgccggcctgctgatacgacacggcaccgctttggacgccctg
cccgccttggcgtctaggctttcggtcgatgcagtgtttgccaaccacgatgacgagcct
tgcagcctggcgcgcgatgccgaagtgcagggcttgctggaatgcgcaggcgtggctttt
cacacgttcaaggaccatgtcatttttgaacggcaggaggtgctgacgctggccggccag
ccttataccgtcttcaccccctacaagaaggcctggctgaaaaaggtcgatgccttttac
ctccagccctatccggttgagaagtacgcatccgcgctggctgcccgaccggcagatgaa
cggcaggatgtgcccgcgctggccgagctggggtttgaaaaaaccaacctgtcagcgctc
aggctacccactggcagccagggcgcagaagcgcttttcgacgatttcctggaccgcatg
ccgcactatgcggacacccgcgacttccccgccgttaaaggtccaagttatctgggcgtg
catttgcgttttggcacaatttcgatcaggaaaattacattgaacgcactggcgcagcag
caaacgggcagcgaaggcgccgcaacctggctcagcgaactgatctggcgggatttttat
gcccagatcctggcgaactttccgcatgcggccagcagcgcgttcaagcccggctatgac
gcgattgcatgggaacaaggcgaaaaagccgagctgcttttccaggcctggtgcgagggc
cggaccggctacccgctggtcgatgcagccatggcccaactcaaccagaccggctacatg
cataaccgcctgcgcatggtgacagccagctttctggtcaaggatcttgggatcgactgg
cgctggggtgagcgttactttgccgaaaaactcaatgattttgacctggcatcgaacaac
ggcggctggcagtgggccgccagcacgggctgcgatgcgcagccttacttccgaattttc
aaccccgtcagccaaagcgagaagtttgacgccgacggaaagttcatccgcaagtacttg
ccggtactggcaaaactgcccaaggctgccttgcacagtccgtggctggcttcgccgatg
gaaagggctgcagcaagcgtggcactgggcagcaactacgcaaggcctgtcgtagcgcat
gccgaagcgcgtgcgctgaccttgcagcgctacgccctcgtgaaaaagtcctga
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