KEGG   Polaromonas naphthalenivorans: Pnap_3379
Entry
Pnap_3379         CDS       T00459                                 
Name
(GenBank) signal recognition particle subunit FFH/SRP54 (srp54)
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
pna  Polaromonas naphthalenivorans
Pathway
pna02024  Quorum sensing
pna03060  Protein export
pna03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pna00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    Pnap_3379
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Pnap_3379
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Pnap_3379
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pna02044]
    Pnap_3379
Enzymes [BR:pna01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     Pnap_3379
Secretion system [BR:pna02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   Pnap_3379
  Eukaryotic Sec-SRP protein
   Pnap_3379
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin CbiA AAA_22 APS_kinase AAA_30 AAA_16 cobW AAA_33 nSTAND3 AAA_31 AAA_18 AAA_14 AAA_24 AAA_17 ABC_tran AAA_19 Helicase_RecD T2SSE YqeC Thymidylate_kin ResIII TsaE ArsA_ATPase DO-GTPase1 AAA_28 KTI12 Rad17
Other DBs
NCBI-ProteinID: ABM38676
UniProt: A1VSP8
LinkDB
Position
complement(3581797..3583155)
AA seq 452 aa
MATALTDKLSRLVKEMRGQARITESNVQDMLREVRMALLEADVALPVVRDFIARVKEKAL
GQEVMGSLSPGQALVGIVSKELAATMGEGVSDINLAAQPPAVILMAGLQGAGKTTTTAKL
AKHLIEKRKKKVLTVSGDVYRPAAIEQLKVVTKQAGAEWFPSTPDQKPADIARAALDYAK
RHFFDVLLVDTAGRLAIDEALMNEIKELHAILKPIETLFVVDAMQGQDAVNTAKAFKEAL
PLTGIILTKTDGDSRGGAALSVRQITGAPIKFSGTSEKLDGLEVFDAERHAGRILGMGDI
VALVEQMASGVNMAEAQKLAAKIKSGDGFDLNDFLSQLQQMKSMGGLSSLLDKLPTQMAA
KAGSIDMDKAEKDMKRKEGIILSMTPLERRKPELIKATRKRRIAAGSGVHVQEVNRLLNE
FEQMQGMMKKMKGSGMMKMMKRMGGMKGMPKF
NT seq 1359 nt   +upstreamnt  +downstreamnt
atggctacagcccttaccgacaagttatcccgcctcgtcaaggaaatgcgcggccaggcc
cgcatcaccgaatccaatgtgcaggacatgctgcgcgaagtccgcatggcgctgctggag
gccgacgtggccctgccggtggtgcgcgacttcattgcccgcgtcaaggaaaaagcgctg
ggccaggaggtgatgggctcgctctcgccgggccaggcgctggtcggcattgtcagcaag
gaactggccgccaccatgggcgagggcgtgagcgacatcaacctggccgcgcagccgccc
gccgtcatcctgatggccggcctgcagggcgcgggcaagaccacgaccaccgccaagctg
gccaagcacctgattgaaaagcgcaagaaaaaggttctgacggtttctggcgacgtgtac
cggccggccgccatcgagcagctcaaggtcgtcacgaagcaggccggggccgaatggttt
ccgagcacgcccgaccagaagccggccgacatcgcccgcgccgcgctcgactacgccaag
cggcatttcttcgacgtgctgctggtcgataccgccggccggctggcgattgacgaagcc
ttgatgaatgaaatcaaggaactgcacgccatcctcaagccgattgagacgctgttcgtg
gtcgatgccatgcagggccaggatgcggtcaacacggccaaggccttcaaggaagcgctg
ccgctgaccggcatcatcctgaccaagaccgatggcgactcgcgcggcggcgcggcgctg
tcggtgcgccagatcaccggcgcgccgatcaagttctcgggcaccagcgaaaaactcgac
ggtctggaggtgtttgacgccgagcgccatgccggccgcatcctgggcatgggcgacatc
gtcgcgctggtcgagcagatggcgtcgggcgtgaacatggccgaggcgcaaaagctcgcc
gccaagatcaagtccggcgacggctttgacctcaacgattttctgagccagctgcagcag
atgaagagcatggggggcctgtccagcctgctcgacaagctgccaacgcaaatggccgcc
aaggccggctccatcgacatggacaaggccgaaaaagacatgaagcgcaaggagggcatc
attttgagcatgacgccgctggagcggcgcaagcccgaactcatcaaggcgacgcgcaag
cgccgcatcgccgccggctcgggcgtgcatgttcaggaggtcaaccgcctgctgaatgaa
tttgagcagatgcagggcatgatgaaaaagatgaagggcagcggcatgatgaagatgatg
aagcgcatgggcggcatgaaggggatgccgaagttctga

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