Polaromonas naphthalenivorans: Pnap_3435
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Entry
Pnap_3435 CDS
T00459
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pna
Polaromonas naphthalenivorans
Pathway
pna00300
Lysine biosynthesis
pna00470
D-Amino acid metabolism
pna01100
Metabolic pathways
pna01110
Biosynthesis of secondary metabolites
pna01120
Microbial metabolism in diverse environments
pna01230
Biosynthesis of amino acids
Module
pna_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pna00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Pnap_3435
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Pnap_3435
Enzymes [BR:
pna01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
Pnap_3435
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
ABM38732
UniProt:
A1VSV4
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All DBs
Position
complement(3644328..3645215)
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AA seq
295 aa
AA seq
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MPFMRIRFTKMQGAGNDFVMLDETRGPLGLSPAHYRFLADRHFGVGADQILTVRPSPGEG
IDFEYVIHNADGGEVEQCGNGARCFVRFVREQGLTTKDAVKVKTLGGIIEPCMQPDGRVT
VNMGAPVFELERIPFNPAGLTPQTAGSWQKWPLALDGHAQAAPVFVAVVSMGNPHAVQLV
DDVDTAPVLEAGPLIEHHPSFPRRVNAGFMQVVSRSQIRLRVYERGAGETLACGTGACAA
VVAGIRLGLLDSRVDVLTRGGQLTIEWAGTLDAPVMMTGPATTVFESEIEVPDTP
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgccttttatgcgaatccgatttaccaaaatgcagggcgcgggcaacgatttcgtgatg
ctcgacgagacccgtggcccgctgggcttgagccccgcccactaccgtttcctggccgac
cgccactttggcgtcggcgccgaccagatcctgacggtgcggccttcgccgggcgaaggc
atcgacttcgagtacgtgatccacaacgccgacggcggcgaggtcgagcagtgcggcaac
ggcgcgcgctgctttgtgcgtttcgtgcgcgagcagggcctgaccaccaaggacgcggtc
aaggtcaagaccctgggcggcatcatcgagccgtgcatgcagcccgacggccgcgtgacg
gtcaacatgggcgcgccggtgtttgagctggagcgcatcccgttcaaccccgccggcttg
acgccccaaaccgccggttcatggcaaaaatggccgcttgcgctggatgggcatgcgcag
gctgctcctgttttcgtagcggtcgtgtcaatgggaaatccgcatgcggtgcaactggtg
gacgatgtcgatactgccccggttcttgaggccggtccgctgatcgagcaccatccgtcg
ttccccaggcgcgtgaacgccggcttcatgcaggtcgtctcgcgcagccagattcgcctg
cgcgtctatgagcgcggcgccggcgagacgctggcctgcggcaccggcgcctgcgcggcg
gtggtggccggcatccggctgggcctgctcgacagccgggtcgatgtgctgacgcgcggc
ggccagctcacgattgaatgggctggcacgcttgatgctccggtgatgatgaccggaccg
gcaacgaccgtgttcgagtcagagattgaagttcccgacacgccgtag
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