Polaromonas naphthalenivorans: Pnap_3586
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Entry
Pnap_3586 CDS
T00459
Name
(GenBank) Peptidoglycan-binding domain 1 protein
KO
K21470
L,D-transpeptidase YcbB
Organism
pna
Polaromonas naphthalenivorans
Brite
KEGG Orthology (KO) [BR:
pna00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pna01002
]
Pnap_3586
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pna01011
]
Pnap_3586
Peptidases and inhibitors [BR:
pna01002
]
Cysteine peptidases
Family C82
Pnap_3586
Peptidoglycan biosynthesis and degradation proteins [BR:
pna01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
Pnap_3586
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
ABM38882
UniProt:
A1VTA4
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All DBs
Position
complement(3808670..3810247)
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AA seq
525 aa
AA seq
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MQIKNRPSWLIRSAAIVLWLCCGSSMAAGQLWFDGERPGAQAREAVQLLAAAATHGLVPQ
DYDASALGLAVSRAAQGTPPEAAAMAQLEQALSTAMERYLSDVHRGRIDPQKIHHNFSPP
QREAFDAAAYLQAALAARRLTDAASEAAPRLPIYAQLREALARYRERVNHPAWRQPLPRL
PGGKAGKLAPGQSYAGLALLAERLTALGDMAPGLPLPARYEGPLVDAAKAFQQRHGLAAD
GVIGKTTLAQLQVMPAARVRQIELALERLRWTPLLQGPRMIVVNIPEFVLRAYEVQDGQI
HVQQEMKIVVGKALDTRTPLFDEDMRFIEFSPYWNVPPSIARAEIVPRLRRDPGYLAREN
MEFVSAGGRVDKTVSAGLLEAVLAGQSRIRQRPGPKNALGDIKFVFPNSDNIYLHHTPAT
QLFERARRDFSHGCIRVEHPVALAKFVLKNMPEWTPERIQNAMSRGESATLRLAEPVPVL
IAYGTTLVKDGRTFFFDDIYGLDRLLDAALRKHSGSLAPTNGDQS
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcaaaaacaggccgtcatggctcatccgcagcgcggccatcgtgctgtggctg
tgctgcggcagttccatggctgcgggccaactctggttcgatggcgaaagacccggcgcg
caggcccgtgaagcggttcaactgctggcggcggctgccacccacggcctggtgccgcag
gactacgacgccagcgcgctggggctggctgtcagccgcgccgcgcaggggactccgccg
gaagctgccgcgatggcgcagcttgagcaggcgctgagcacggcgatggagcgctacctg
tccgacgtgcaccggggccgcatcgacccgcaaaaaatccatcacaacttcagcccgccg
cagcgcgaggcgttcgacgcggcggcctacctgcaggcggccctggcggcccggcggctg
accgacgctgcgtccgaagccgcgccgcgcctgccgatttacgcgcagttgcgcgaggcc
ctggcgcgctaccgcgagcgcgtcaaccatccggcctggcgccagcccttgccgcgcctg
ccgggcggcaaggcgggcaagctggcgccggggcaaagctatgcggggctggccctgctg
gccgagcggctgaccgcgctgggcgacatggcgcctggcctgcccttgccggcgcgttat
gaagggccgctggtggacgcggccaaggcttttcagcagcggcacggcctggccgccgac
ggcgtgatcggcaaaaccacgctggcgcagctgcaggtgatgcccgctgcccgcgtgcgg
cagatcgaactggcgcttgagcggctgcgctggacgccgctgctgcaggggccgcgcatg
attgtcgtcaacatccccgagttcgtgctgcgcgcctacgaagtgcaggacggccagatc
catgtgcagcaggaaatgaagatcgtcgtcggcaaggcgctggacacgcgcacccccttg
ttcgatgaagacatgcgcttcatcgagttcagcccgtactggaacgtgccgccttccatc
gcccgcgccgaaatcgttccccggctgcggcgcgaccccggctatctggcgcgggagaac
atggagttcgtctcggccggtggccgcgttgacaagacggtttcggcggggctgctggaa
gccgtgctcgccggccagtcgcgcatccgccagcggccggggccgaaaaatgcgctcggc
gacatcaagttcgtgtttccgaacagcgacaacatctacctgcaccacacgccggccacg
cagctgttcgagcgcgctaggcgcgacttcagccatggctgcatccgcgtcgagcatccg
gttgcactggccaaattcgtcctcaagaacatgccggaatggacgccggagcgcatccag
aatgccatgagccggggcgaatcggccacgctcaggctggccgagccggtgccggtgctg
attgcctacggcaccacgctggtcaaggacggccggacttttttctttgacgacatctat
gggctggaccgcctgctggacgctgccttgcgcaagcattcaggctcgctcgcgcccacc
aacggagaccaatcatga
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