Polaromonas naphthalenivorans: Pnap_3607
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Entry
Pnap_3607 CDS
T00459
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pna
Polaromonas naphthalenivorans
Pathway
pna00061
Fatty acid biosynthesis
pna00071
Fatty acid degradation
pna01100
Metabolic pathways
pna01212
Fatty acid metabolism
pna02024
Quorum sensing
pna04146
Peroxisome
Module
pna_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pna00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Pnap_3607
00071 Fatty acid degradation
Pnap_3607
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Pnap_3607
09145 Cellular community - prokaryotes
02024 Quorum sensing
Pnap_3607
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pna01004
]
Pnap_3607
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pna04147
]
Pnap_3607
Enzymes [BR:
pna01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Pnap_3607
Lipid biosynthesis proteins [BR:
pna01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Pnap_3607
Exosome [BR:
pna04147
]
Exosomal proteins
Exosomal proteins of breast milk
Pnap_3607
Exosomal proteins of breast cancer cells
Pnap_3607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ABM38903
UniProt:
A1VTC5
LinkDB
All DBs
Position
3836500..3838446
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AA seq
648 aa
AA seq
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MQTTFPQLLLKHAAERPAAAAMREKEYGIWQAHSWSALAGLVAQLAAGLNQAGLRRGEHM
VVIGANRPRLYATMLAVQSLGAIPVPLYQDAVGAECVFPLNNAEVRFAMVEDQEQVDKLV
EIRDRCPQISNIYYDDPRGLRKYSEPGLDSLDALIESGQAFVAKNPQWFAAEVAKVQPND
VAAMFFTSGTTGNPKGVVHTHSTLLDRATAGAEFDKLTSAEEVLAYLPPAWIGQNIFSYA
QWLACGYVVNCPESAGTVTIDLKEIGPTYYFAPPRIFEGLLTSVMIRMEDAGTLKRKMFE
ACMNVARRVGPALMNGEPVGALDRIKYALGNLLVYGPLRNNLGFSRVRVAYTAGEAIGPD
LFTFYRSIGINLKQLYGSTETAVFVCLQPDNQARADTVGVPIRGVQIKVAGNGEIMVKSA
GLLKEYYKNPTATAEVLTADGWYHTSDAGFLDVHGHLKIIDRVKDVGRIKGGPNDGAMFA
PKYVENKLKFFPFIKEVVALGDGRERVCVMINIDFDAVGNWAERRNLPYAGYTDLAQKPE
VYQLMKECVEKVNADLASDLLLAGSQVSRFLILHKELDADDGELTRTNKVRRGFIADKYG
VLVEALYAGKTEQYIETVVKFEDGRTGSVSATLKLSDAKTFSPVKAAA
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgcagaccacattcccccaattgctgctcaagcatgccgccgagcgccctgcggcagcg
gccatgcgcgagaaagaatacggcatctggcaggcgcacagctggtcagccctggccgga
ctggtcgcgcagctggccgcagggctgaaccaggcgggcctgcggcgcggcgagcacatg
gtggtgattggcgccaaccgcccgcgcctgtatgcgaccatgctggcggtgcagtcgctg
ggcgcgattccggtgccgctgtaccaggacgcggtcggcgccgaatgcgtctttccgctg
aacaacgccgaagtgcgctttgccatggtcgaggaccaggagcaggtggacaagctggtc
gagatccgcgaccgttgcccgcaaatctccaacatctactacgacgacccgcgcggcctg
cgcaagtacagcgagcccggccttgattcgctcgatgcgctgatcgagtcgggccaagcc
tttgtcgccaaaaacccgcagtggtttgccgctgaagtcgccaaggtccagccgaacgac
gtggcggcgatgttcttcacctccggcaccaccggcaatcccaagggcgtggtgcatacc
cacagcacgctgctcgaccgcgccacggctggcgccgaattcgacaagctgacctccgcc
gaggaagtgctggcctacctgccgccggcctggatcggccagaacatcttcagctacgcc
cagtggctggcctgcggctatgtggtcaactgccccgagtcggccggcaccgtgacgatt
gacctgaaggaaatcggcccgacctactactttgcgccgccgcgcatttttgaaggcctg
ctgaccagcgtgatgatccgcatggaagacgccggcacgctcaagcgcaagatgttcgaa
gcctgcatgaacgtcgcccggcgcgtcggcccggcgctcatgaacggcgagccggtcggc
gcgctggaccgcatcaaatacgctctcggcaacctgctcgtgtacggcccgctgcgcaac
aacctgggcttcagccgggtgcgcgtggcctataccgccggcgaggcgattggcccggac
ctgttcacgttttaccgctcgatcggcatcaacctcaagcagctctacggctcgaccgag
accgccgtgttcgtctgcctgcagcccgacaaccaggcgcgcgccgacaccgtgggcgtg
ccgattcgcggcgtgcaaatcaaggtcgccggcaacggcgaaatcatggtcaagtcggcc
gggctgctcaaggaatactacaaaaacccgacggccacggccgaggtgctgaccgccgac
ggctggtaccacaccagcgacgccggcttcctggacgtacacggccacctgaagatcatc
gaccgcgtgaaggacgtgggccgcatcaagggcgggccaaacgacggcgccatgttcgcg
cccaagtatgtcgagaacaagctcaagttcttccccttcatcaaggaagtcgtggcgctg
ggcgacgggcgcgagcgcgtctgcgtgatgatcaacatcgacttcgatgccgtgggcaac
tgggccgagcggcgcaacctgccctacgccggctacaccgacctggcgcaaaagcccgag
gtctatcagctcatgaaggaatgcgtcgagaaggtcaatgccgacctggccagcgacctg
ctgctggccggcagccaggtcagccgcttcctgatcctgcacaaggaactcgatgccgac
gatggcgaactgacgcggaccaacaaggtgcggcgcggctttatcgccgacaagtacggc
gtgctggtcgaggcgctgtatgccggcaagaccgagcagtacatcgagaccgtcgtcaag
ttcgaggacggccgcaccggcagcgtcagcgccacgctcaagctgtcggacgccaaaacc
ttttccccggtcaaggccgctgcttga
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