Polaromonas naphthalenivorans: Pnap_3797
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Entry
Pnap_3797 CDS
T00459
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pna
Polaromonas naphthalenivorans
Pathway
pna00061
Fatty acid biosynthesis
pna00071
Fatty acid degradation
pna01100
Metabolic pathways
pna01212
Fatty acid metabolism
pna02024
Quorum sensing
pna04146
Peroxisome
Module
pna_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pna00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Pnap_3797
00071 Fatty acid degradation
Pnap_3797
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Pnap_3797
09145 Cellular community - prokaryotes
02024 Quorum sensing
Pnap_3797
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pna01004
]
Pnap_3797
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pna04147
]
Pnap_3797
Enzymes [BR:
pna01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Pnap_3797
Lipid biosynthesis proteins [BR:
pna01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Pnap_3797
Exosome [BR:
pna04147
]
Exosomal proteins
Exosomal proteins of breast milk
Pnap_3797
Exosomal proteins of breast cancer cells
Pnap_3797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF463
Motif
Other DBs
NCBI-ProteinID:
ABM39093
UniProt:
A1VTW5
LinkDB
All DBs
Position
complement(4048063..4049763)
Genome browser
AA seq
566 aa
AA seq
DB search
MNALMNAEVADRPWLKAYPAGVPADIDASQYPSLVALMEESFKKYRDRVAYSFMGKDITF
GETDSLSVAFGAYLQGLGLAKGDRVAIMMPNVPQYPVAVAAILRAGYVVVNVNPLYTPRE
LEHQLKDSGAKAIVIVENFACTLEQCLANTPVRHIVLCAMGDQLGLLKGMLVNYVVRSVK
KMVPPFNLPGAVPFNDALAQGARGALKRPAIEPDDIAVLQYTGGTTGVSKGAVLLHRNVI
ANVLQSEAWNGPAMASLPAGEQPTYVCALPLYHIFAFTVNMMLGMRTGGKNILIPNPRDL
PAVLKELSKHKVNSFPAVNTLFNGLANHPDFNTVDWSHLKISLGGGMAVQSAVAKLWLQK
TGCPICEGYGLSETSPSASCNPTNSKAFAGTIGVPIPSTWFKLLDDDGHEVPPGQPGEIA
IKGPQVMAGYWQRPDETDKVMTPDGYFKSGDIGIMDENGFFKIIDRKKDMVLVSGFNVYP
NEIEDVVAKLDGVMECACVGVLDEKSGEAVKLVIVKKNPDLTEAQVRAYCKENLTGYKQP
KVVEFRTELPKTPVGKILRRELRDKR
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcactgatgaacgcagaggtggctgatcgcccgtggctaaaggcttatccggca
ggcgttccggccgacattgatgcttcgcaatatccgtcgctggtcgcattgatggaagaa
agcttcaagaagtaccgggaccgcgtcgcctacagcttcatgggcaaggacatcactttt
ggcgagaccgacagcctgtcagttgctttcggcgcttatctgcagggtctgggtctggcc
aagggcgaccgtgtggccatcatgatgcccaatgtgccgcagtatccggtggcggttgcg
gccatcctgcgcgccggctatgtggtggtcaatgtgaacccgctctacaccccgcgcgaa
ctcgagcaccagctcaaggattcaggcgccaaggccatcgtgatcgtcgagaattttgcc
tgcacgctggagcagtgcctggccaacacgccggtcaggcacatcgtgctgtgcgccatg
ggcgaccagctggggctgctcaagggcatgctcgtcaattacgtggtgcgcagcgtcaag
aagatggtgccgcccttcaacctgccgggcgcggtgccttttaacgatgccctggcgcag
ggcgcgcgcggcgcactcaagcggcccgctatcgaacccgacgacattgccgtgctgcag
tacaccggcggcacgactggcgtttccaagggggccgtgctgctgcaccgcaacgtgatt
gccaacgtgctgcagtccgaagcctggaacggcccggccatggccagcctgccggcgggc
gagcagcctacttatgtgtgcgccttgccgctgtaccatatttttgccttcacggtgaac
atgatgttgggcatgcggaccggcggaaaaaacatcctgatccccaatccgcgcgacctt
ccggcggtgctcaaggagctttccaagcacaaggtcaacagctttccggccgtcaacacc
ctgttcaacggtctggccaaccacccggacttcaacacggtggactggtcgcacctgaaa
atctcgctgggcggcggcatggcggtgcaaagcgcggtggccaagctgtggctgcaaaag
accggctgcccgatttgcgaaggctacggcctgtcggaaacctcgccatcggcgagctgc
aacccgaccaacagcaaggccttcgccggcaccatcggcgtgccgattcccagtacctgg
ttcaagctgctcgacgacgacggccatgaagtgccgcctggccagcctggcgagattgcc
atcaaaggcccgcaggtcatggcgggctactggcagcggcctgacgagaccgacaaggtc
atgacccccgacggctatttcaaatccggcgacatcggcatcatggatgaaaacggattt
ttcaagatcattgaccgcaagaaggacatggtcctggtcagcgggttcaatgtctatccc
aacgagatcgaagacgtcgtggccaaactggacggcgtcatggaatgcgcctgcgtcggc
gtgctcgatgaaaaatcgggtgaagccgtcaagctcgtgatcgtgaagaagaatcccgac
ctgaccgaagcgcaggtacgtgcctattgcaaggaaaacctcaccggctacaagcagccc
aaggtggtggagttccgcaccgaactgcccaagacgccggtcggcaagattcttcgccgc
gaactgcgcgacaagcgctaa
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