Polaromonas naphthalenivorans: Pnap_3847
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Entry
Pnap_3847 CDS
T00459
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
pna
Polaromonas naphthalenivorans
Pathway
pna00550
Peptidoglycan biosynthesis
pna01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pna00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Pnap_3847
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pna01002
]
Pnap_3847
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pna01011
]
Pnap_3847
Enzymes [BR:
pna01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Pnap_3847
Peptidases and inhibitors [BR:
pna01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
Pnap_3847
Peptidoglycan biosynthesis and degradation proteins [BR:
pna01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
Pnap_3847
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Phage_portal
Motif
Other DBs
NCBI-ProteinID:
ABM39143
UniProt:
A1VU15
LinkDB
All DBs
Position
4103738..4105324
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AA seq
528 aa
AA seq
DB search
MPRQPAGGRRHASSDYPACQRARPATDNRRMLLTPFPARFTARLTAGLLAALASLSASAQ
TLPPEVDALLARAKVPREAFAAVVVDAAPAINGRAAPLLSWRAGSAMNPASVMKLVTTYA
GLELLGPAYTWSTPVYADGPIANGVLSGNLIIQGRGDPKLVMERLWLLLRRVQGLGIKTI
TGDILLDRSAFAASTQHPGDFDGEALRPYNVQPDALLLNYKSVVMTFAPNPGSGSASISY
DPPLAGVRMQPGVPLSAGSNGRAGLAECGDYRAQLQPDFADPLRMAFAGSYPAACGEKVW
AIAYPDPASYAQRAIAGLWQEMGGTLGGQVRDGVAPPGLAPAFEMESASLAEIIRDINKF
SNNVMAQQLFLTLSLQRPGGASNEASREAVRGWWQGRFGAQNGGPGNAPDMPVLDNGSGL
SRLERVTPQGLARMLQTAYVSGAMPELMASLPISGVDGTLKRSKSQVSQGWAHLKSGTLR
DATALAGYVHTPSGRRLVVVGIVNHANAPAARPALEALVDWAVKEGSR
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgccagcccgcaggcggtcggcgtcacgcatccagcgattatccggcctgccag
cgcgcccggccggcaactgataatcgccgcatgcttttgacccccttcccggcccgattc
accgcgcgcctgaccgccggcctgctggcagcgttggccagcctgtccgccagcgcccaa
accctgccgcccgaagtcgatgccctgctggcgcgtgccaaggtgccgcgcgaggccttc
gccgccgtggtcgtcgatgccgcaccggccatcaacggcagggccgcgccgctgctcagc
tggcgcgccggcagcgccatgaaccccgcgtcggtcatgaagctggtcacgacctatgcc
gggctggaactgctcggcccggcctacacctggagcacgccggtctatgccgacggcccg
attgccaatggcgtgctgtccggcaacctcatcatccagggccggggcgaccccaagctg
gtgatggagcggctgtggctgctgctgcgccgggtgcagggcttgggcatcaagaccatc
acaggcgacatcctgctcgaccgcagcgcctttgcggcgtcaacgcaacaccccggcgac
ttcgacggcgaggcgctgcgcccctacaacgtgcaacccgatgcgctgctgctcaactac
aagtcggtggtgatgacgtttgcgccgaatccgggcagcggcagcgccagcatcagctac
gacccgccgctggccggcgtgcggatgcagcccggcgtgccgctgtcggcgggaagcaac
ggccgcgctggtctggccgaatgcggcgactaccgggcgcagctccagcccgactttgcc
gacccgctgcgcatggcctttgccggcagctacccggcggcctgcggcgagaaggtctgg
gccatcgcctaccccgacccggccagctatgcgcagcgggcgattgccgggctgtggcag
gaaatgggtggcacgctgggcggacaggtcagggatggcgtggccccgcccggattggcg
ccggcgttcgagatggaatcggcgtcgctggccgaaatcatccgcgacatcaacaagttc
agcaacaacgtgatggcgcagcagctgttcctgacgctcagcctgcagcgcccgggcggc
gccagcaacgaggcttcgcgcgaggcggtgcgcggttggtggcagggccgttttggtgcg
cagaacggcgggccgggcaatgccccggacatgccggtgctggacaacggctcgggcctg
tcgcggctggagcgcgtcacgccacagggcctggcgcgcatgctgcagaccgcctatgtc
tcgggcgccatgcccgagctgatggcctcgctgccgatcagcggcgtcgatggcaccttg
aagcgcagcaagtcgcaggtctcgcagggctgggcgcacctgaagagcggcaccctgcgc
gacgccaccgcgctggccggctacgtgcacacgcccagcggccggcgcctggtggtggtc
ggcatcgtcaaccacgccaacgcaccggcggcgcggccggcgctcgaagcgctggtggac
tgggccgtcaaggaaggcagccggtga
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