Polaromonas naphthalenivorans: Pnap_4112
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Entry
Pnap_4112 CDS
T00459
Name
(GenBank) tRNA modification GTPase trmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
pna
Polaromonas naphthalenivorans
Brite
KEGG Orthology (KO) [BR:
pna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pna03016
]
Pnap_4112
Transfer RNA biogenesis [BR:
pna03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
Pnap_4112
Prokaryotic type
Methyltransferases
Pnap_4112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
Ras
Arf
AIG1
Roc
MCM
GlnR_1st
ABC_ATPase
BLOC1S3
AAA_29
ABC_tran
AAA_24
Motif
Other DBs
NCBI-ProteinID:
ABM39402
UniProt:
A1VUS4
LinkDB
All DBs
Position
complement(4397951..4399387)
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AA seq
478 aa
AA seq
DB search
MLARHHHPIVAIATAPGRGGVGIVRLSGQRIAPVVQALCGRKLSPRQATYLPFRDAHGQI
IDKGLAIFFPAPHSYTGEDVLELQAHGGPVVLQLLLARCLEAGAALDPATGQPVLAQLRV
AEPGEFTERAFLNDKIDLAQAEAIADLIDASTETAARSAARSMSGEFSQAVNTLLEQLIH
LRMLVEATLDFPEEDIDFLQQADAQGQLLRLQATLASVLARATQGAILREGIKVVIAGQP
NVGKSSLLNALAGAELAIVTPVAGTTRDKVSQLIQIEGVPLHVVDTAGLREALDEVEKIG
IQRAWTEIESADAVLFLHDLARHDATENPLYAINYIADDARLQSALALKLPKNTAIIDVW
NKSDMAGPELLRQVNGGVLISAKTGAGLQALREQLLRVVGWQAAPEGVFMARERHVSALR
SVQIQLLTAQNQLQAAVPALDLLAEDLRQAQLHLSSITGAFNADDLLGEIFSKFCIGK
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgctggcccgtcatcatcatcccatcgttgccatcgccactgcgcccggtcgtggcgga
gtcggcattgtccgcctctccggccagcgaatcgccccggttgtccaggccctgtgtggg
cgtaaactttccccccgccaggcgacttacctgccgtttcgcgatgcacatgggcagatc
atcgacaaagggctggcgatattcttccccgctccccattcctatacgggagaagacgtg
ctggagttgcaggcgcatggcggcccggtcgtgttgcaactgcttttggcgcggtgtctt
gaagcaggcgctgcgcttgacccggccacaggtcaaccggtgctggcccaattgcgggtt
gccgaacccggtgaatttaccgagcgggcttttctcaatgacaagatcgacctggcgcag
gccgaagccatcgccgacctgattgatgccagcaccgaaaccgctgcgcgttctgcggcg
cgctcgatgtcgggcgagttttcgcaagcggtcaatacgctgctggagcagttgattcac
ctgcgcatgctggtcgaagccacactggattttcccgaagaagacattgattttctgcag
caggccgatgcgcaaggccagttgctgcgcctgcaggcaacgctggccagcgtgcttgcg
cgtgccacgcagggagcgattctgcgtgaaggcatcaaggtcgtgattgccgggcagccc
aacgtcggcaaaagctcgctgctcaatgcgctggccggcgctgaactggccatcgtgaca
cccgttgccgggacaacccgcgacaaggtttcgcagctgatccagattgaaggcgtgccg
ctgcatgtggtggacacggcaggtttgcgtgaggcacttgatgaagtcgagaaaattggc
atccagcgggcctggaccgaaatcgaaagtgccgatgccgtgctgtttttgcacgacctg
gcccgtcatgatgcaaccgaaaacccgctttatgctataaattacatagctgatgatgcc
cgtctgcaaagcgcattggccttaaaacttccaaaaaatacagccatcatcgatgtctgg
aataaatccgacatggccggcccggagttgctgcgtcaggtaaacggtggcgtgctgatt
tccgccaagaccggggccggtctgcaggccctgcgcgagcagttgctgcgggtggttgga
tggcaagcggcccccgaaggcgttttcatggcacgcgagcgtcatgtgagcgcactgcgc
agcgtacaaattcagttgttgactgcgcagaaccagttgcaggcggctgtgccggcgctg
gatttgctggcggaagatttgcgccaggcgcagctgcacctgagttcaattacgggggct
tttaacgccgacgatctactgggagagattttttcaaagttttgtatcgggaaatag
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