Entry |
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Name |
(GenBank) DNA gyrase subunit B
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KO |
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Organism |
pna Polaromonas naphthalenivorans
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Brite |
KEGG Orthology (KO) [BR:pna00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:pna03032]
Pnap_4119
03400 DNA repair and recombination proteins [BR:pna03400]
Pnap_4119
Enzymes [BR:pna01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Pnap_4119
DNA replication proteins [BR:pna03032]
Prokaryotic type
DNA Topoisomerases
Pnap_4119
DNA repair and recombination proteins [BR:pna03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Pnap_4119
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
4405728..4408352
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AA seq |
874 aa
MTEENKLNEADQVHVSDGLAGEGSSNFQPKIDTNQAGASEAYGEGSIQILEGLEAVRKRP
GMYIGDTSDGTGLHHLVFEVVDNSIDESLAGHCDDILVTIHTDNSVSVVDNGRGIPTGVK
MDDKHEPKRSAAEIALTELHAGGKFNQNSYKVSGGLHGVGVSCVNALSKMLRLTIRRDGK
VHVMEFSRGFVQNRIVEMANGVEVSPMKVMGPTDKRGTEVHFLPDTDIFKENNDFHYEIL
SKRLRELSFLNNGVRIRLKDERSGKEDDFSGTGGVKGFVEFINKGKTVLHPNVFNAMGDR
QSDQGTNIGVEVAMQWNSGYSEQVLCFTNNIPQRDGGTHLTGLRAAMTRVINKYIDDTEL
AKKAKVEVTGDDMREGLCCVLSVKVPEPKFSSQTKDKLVSSEVRGPVEDIVSRLLNDYLQ
ERPNDAKIIVGKIIEAARAREAARKARDMTRRKGVLDGMGLPGKLADCQEKDPAMCEIYL
VEGDSAGGSAKQGRDRKFQAILPLKGKILNVEKARYEKLLTSNEILILITALGTGIGKGG
GVGGTPGADDFNVAKLRYHRIIIMTDADVDGAHIRTLLLTFFYRQMPELIERGHIYIAQP
PLYKVKAGKEEQYLKDTAALDGFLLRIALKDASVQTGADDSSVLTGDALGELARKHQQAE
SVISRLMGFMDAEALRAIADGVSLNLDTVADAEVSAVALQAKLRELNTTGAPAEVAGEFD
VRSDKPILRISRRHHGNVKSSVLTQDFVVGADYAVLAEAASTFHGLIGDGAKVMRGEGER
RKEEKISDFRQAMRWLIGQAEHGTARQRYKGLGEMNPAQLWETTLDPKVRRLLKVQIDDA
IEADRVFTMLMGDEVEPRREFIEQNALRAGNIDI |
NT seq |
2625 nt +upstreamnt +downstreamnt
atgactgaagaaaacaaactgaacgaagccgaccaggtacatgtgtccgacgggttggcg
ggcgaaggaagctccaatttccagcccaaaatcgacaccaaccaggcgggcgcctctgaa
gcctacggcgaaggttcgatccagattctggaaggcctggaagcagtgcgcaagcgcccc
ggcatgtacatcggcgacacctcggacggcaccgggctgcatcacctggtgttcgaggtg
gtcgataactccatcgacgagtcgctggccggccactgcgatgacatcctggtcaccatc
cacaccgacaactcggtcagcgtggtcgataacggacgcggtattccgaccggcgtgaag
atggacgacaagcacgagccgaaacgctcggcggccgaaattgccctgaccgaactgcat
gccggcggcaagttcaaccagaacagctacaaggtgtcgggcggcctgcacggcgtcggc
gtgagctgcgtgaatgccttgtcaaaaatgctgcggctgacgattcgccgcgatggcaag
gtgcatgtcatggagttttcccggggctttgtgcaaaaccgcatcgtcgagatggccaat
ggcgtcgaggtgtcgccgatgaaggtgatggggccgaccgacaagcgcggcaccgaagtc
cacttcttgcccgacaccgacatcttcaaggaaaacaacgatttccattacgaaatcctc
agcaagcgcctgcgcgaactgagctttttgaacaacggcgtacgcattcgcctgaaggac
gaacgcagcggcaaggaggatgacttttccggcaccggcggcgtcaagggctttgtggaa
ttcatcaacaagggcaagacggtcttgcaccccaacgtgttcaatgccatgggcgaccgc
cagagcgaccagggcaccaacatcggcgtcgaagtggcgatgcagtggaacagcggctac
agcgagcaggtgctgtgtttcaccaacaacattccccagcgcgacggcggcacccacctg
accggcctgcgcgcggccatgacgcgggtcatcaacaaatacatcgacgacaccgagctg
gccaagaaagccaaggtcgaggttaccggcgacgacatgcgcgaaggcctgtgctgcgtg
ctgagcgtgaaggtgcccgagcccaagttttcgagccagaccaaggacaagctggtgtcc
agcgaagtgcgcggcccggtcgaggacatcgtcagccgcctgctgaacgactacctgcag
gaacgcccgaacgacgccaagatcatcgtcggcaagatcatcgaagccgcccgagccaga
gaagccgcccgcaaggcgcgcgacatgacgcgccgcaagggcgtgctcgacggcatgggc
ctgcccggcaagctggccgactgccaggaaaaagacccggcgatgtgcgagatttacctg
gtcgagggcgactccgccggcggctcggccaagcagggtcgtgaccgtaagttccaggca
attttgccgctcaagggcaagatcctgaacgtcgaaaaagcccgctacgaaaagctgctg
accagcaacgaaatcctgattttgatcaccgctttgggcaccggcatcggcaagggcggc
ggcgtgggcggcacgcctggcgccgacgacttcaacgtcgccaagctgcgctaccaccgc
atcatcatcatgaccgatgccgacgtggacggcgcgcacatccgcacgctgctgctgacc
tttttctaccgccagatgcccgagctgatcgagcgtggtcacatctacatcgcccagccg
ccgctgtacaaggtcaaggccggcaaggaagagcagtacctgaaggacacggccgcactc
gacggcttcctgctgcggattgcgctgaaggatgcgtcagtgcaaaccggcgccgacgac
agctccgtgctgaccggcgatgcgctgggcgaactggcgcgcaagcaccagcaggccgag
tcggtgatcagccgcctgatggggttcatggatgccgaggcgctgcgcgcgattgccgat
ggcgtgtcgctcaacctggacacggtggccgacgccgaggtgtccgccgtggcgctgcag
gccaagctgcgcgagctgaacacgacaggcgcaccggccgaagtggccggcgaattcgac
gtgcgcagcgacaagccgattctgcgcatcagccgccgccaccacggcaatgtcaagagc
agcgtgctgacgcaggacttcgtggtcggtgccgactatgccgtcctggccgaagcggcc
agcactttccacggcctgatcggcgacggcgccaaggtcatgcgcggcgaaggcgagcgg
cgcaaggaagaaaagatcagcgacttccgtcaggccatgcgctggctgatcggccaggct
gaacacggcacggcacgccagcgctacaaggggctgggcgagatgaacccggcccagctc
tgggaaaccacgctcgaccccaaggttcgccgcctgctcaaggtgcagatcgacgacgcc
atcgaagccgaccgggtgttcaccatgctgatgggcgacgaggtcgagccgcgccgcgaa
ttcattgagcaaaatgcgctgcgggcggggaatatcgacatctga |