KEGG   Polaromonas naphthalenivorans: Pnap_4200
Entry
Pnap_4200         CDS       T00459                                 
Name
(GenBank) TrbL/VirB6 plasmid conjugal transfer protein
  KO
K07344  type IV secretion system protein TrbL
Organism
pna  Polaromonas naphthalenivorans
Pathway
pna02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:pna00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Pnap_4200
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pna02044]
    Pnap_4200
Secretion system [BR:pna02044]
 Type IV secretion system
  Trb secretion system protein
   Pnap_4200
SSDB
Motif
Pfam: TrbL
Other DBs
NCBI-ProteinID: ABM39483
UniProt: A1VV05
LinkDB
Position
pPNAP01:77023..78396
AA seq 457 aa
MNDISVIDRFLNVFSRYIDSGFGLLGGEVAFLTATLVAIDMTLAGLFWAMSHASGGGDDI
IGKLIKKVLYVGAFAYIIGNFNLLAGILFRSFAGLGLVASGSTITQAEFLQPGRLAKVGI
DAGAPILEQISAMAGFPEVFVNLDAITVMLLAWLVVVMSFFVLAVQLFVTLIEFKLTTLA
GFVLVPFALWNKTSFLAEKVLGNVVSSGIKVLVLAVIVGIGTGLFAEFQVTPDEPSIDHA
LTIMLAALAMLGLGIFGPGIATGLVSGAPQLGAGAVAGTALGVAGAAVAVGAAATGVGGA
VAAGARMAPGAAKMAASGARSMASTASSAKSAFQAGSAGAGGGLKGAAAGLGNVAKTGAQ
SVGQKVAAGAKSMKDRTAAAIKPDASASGTGAGAGAGSAAQGGNDAAPTDTQQPAWAKSL
HRRQQISHAASTVAHTLRGGDGGGSGSSPSLRDPSDS
NT seq 1374 nt   +upstreamnt  +downstreamnt
atgaacgacatttccgtcatcgaccgattcctcaatgttttctcgcgttacatcgattct
ggtttcggtctgctgggcggcgaagttgcgttcctgaccgccacgctggtggcaatcgac
atgacactggccggtctgttctgggcgatgagccatgccagcggtggcggcgacgacatc
atcggcaagctcatcaagaaggtgctgtacgtgggtgccttcgcctacatcatcggcaac
ttcaacctgctggccggcatcctgttccgatctttcgcaggcttgggattggtggcgtcg
ggttcgaccatcacccaggccgagttcctgcagccggggcggctggccaaggtcggcatc
gatgccggggcgcccatcctggagcagatcagcgcgatggcgggcttccccgaggtattc
gtgaacctcgatgccatcacggtgatgctgctggcctggctggtggtggtcatgagtttc
ttcgtgctggcggtgcagctcttcgtcacgctgatcgagttcaagctgaccacgctcgcc
ggcttcgtgctggtgccgttcgcactgtggaacaagacctcgtttctcgctgaaaaggtg
ttgggcaacgtggtgtcgtcaggcatcaaggtgctggtgctggcggtcatcgtagggatt
ggcacggggttgtttgccgaattccaggtgacgccggatgaaccctccatcgaccacgca
ctgaccatcatgttggctgcactggcgatgctgggtcttgggatcttcgggccaggcatc
gcgactgggctggtatctggggcaccgcagttgggtgcaggtgctgttgccggaaccgca
ttgggtgtcgcgggagcagcggttgccgtgggtgctgccgccaccggcgtgggcggtgcg
gtggctgccggtgcgcgtatggcgccgggtgccgcaaagatggccgcgagcggtgcccgc
tcgatggcctcgaccgccagcagcgcgaagtccgcgttccaggccggctctgccggtgca
ggtggtggactcaagggtgcggcagcaggattgggcaacgtcgccaagacgggcgcgcaa
tcggtggggcagaaggtcgctgccggagccaagtcgatgaaggaccggactgcggcggcc
atcaagccggatgcctcggcatccgggactggcgctggtgccggagctggctcggccgct
caaggcggcaacgatgccgcacccacagatacccagcaacccgcgtgggccaagagcctg
catcgccgccagcagatcagccatgccgcttcgaccgtcgcccacacgctgcgcggtgga
gacggcggcggctcgggcagtagccccagcctgcgcgacccctcggattcctaa

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