KEGG   Polaromonas naphthalenivorans: Pnap_4961
Entry
Pnap_4961         CDS       T00459                                 
Name
(GenBank) UvrD/REP helicase
  KO
K03658  DNA helicase IV [EC:5.6.2.4]
Organism
pna  Polaromonas naphthalenivorans
Brite
KEGG Orthology (KO) [BR:pna00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pna03400]
    Pnap_4961
Enzymes [BR:pna01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Pnap_4961
DNA repair and recombination proteins [BR:pna03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Pnap_4961
SSDB
Motif
Pfam: UvrD-helicase Helicase_IV_N AAA_19 UvrD_C Zn_ribbon_Top1 UvrD_C_2 AAA_30 Viral_helicase1 ResIII
Other DBs
NCBI-ProteinID: ABM40022
UniProt: A1VWJ4
LinkDB
Position
pPNAP03:complement(155436..158180)
AA seq 914 aa
MAQSWGPSGPGKLFTNSPAWNLTLDGEQFALEVRGKAQTGSVLLLESLAIEPGTFWTALH
FPSKNGKRQSLDGIPNEEAASLRQTLFSTIEQIRHRERVQALLKDFNTVTAPVLTWAKQA
VQAAKDQLQKKGWLTHEFVQRQNEGKPTGLSKYLSTPEVANHVEKQSAQFHADLKFWKHD
FSIFAKGVNERHLAKELIGSKEFFDSVEKSPLTDEQAKAVVCFDNRVLLVASAGSGKTST
MVAKAGYALKMGYCEADRMLLLAFNNDAAAELRQRIQDRLGPLGLPADKVVAKTFHAFGL
DVIGLATGKRPSLAPWVENGKDLEQLMAIVDDLKDRDTGFRISWDLFRVVLGQDLPKFGK
EAQAPDSWDRNSKKEGFRTLNNEVVKSRGEQLIANWFFYNGVRYVYEGAYEVDTADAHHR
QYYPDFYLPDAKAYLEHWALDANGQAPPDFVGYQEGMEWKKQVHAANGTKLLETTVAQLW
SGKAFEYLQTQLQQLGVTLEPNPDRPVPGRKAIENPRLAKTFRSFITHAKSNRLDLGDLK
KRLESGVAGDFKFRHTMFLGLLEKIWTQWEAQLTKDKCIDFDDMLNLATDCVEQGKWKSP
YELVMVDEFQDASQARARLVAGLVSGPDKCLFAVGDDWQSINRFAGADLAVMTDFERRYG
SAVTLKLETTFRCPQSLCDISSAFVQKNPKQLRKAVRSSKPNLAEPVLIIRVDDERQIRA
AVQMRLGEISRENATVGRKPKVLMLGRYQKDKAYLPYANDALELDFITVHSSKGLEADHI
ILPRMTSETMGFPSQIADDPVLLLAMPGGDAFENAEERRLFYVALTRARATVTLITITLK
ESAFVKELVREHQITVRMADGTESSNELCSVCGDGFVVPKNGKYGAFLGCSNYPRCRHTR
NIEQNEVRNHSRKH
NT seq 2745 nt   +upstreamnt  +downstreamnt
atggcgcaaagctggggtccctcgggaccaggaaaactattcacgaactccccggcttgg
aatctgacgttagacggcgagcagtttgctcttgaggtcaggggtaaggctcagacaggc
agcgttctgctcttggagtcactggcgattgagccgggaacattctggactgcacttcat
ttcccgtctaaaaatggcaagcgccaaagccttgatggaattccaaacgaagaggctgca
tcgctaaggcagaccctcttctcaactatcgagcagataagacaccgcgagcgggttcaa
gcgttactgaaggacttcaacacagttaccgcgcctgtattgacctgggcgaagcaagct
gttcaggctgccaaagaccaactgcagaaaaagggctggctcacccatgaatttgtccag
cggcaaaatgaaggcaaacccacagggctgagcaaatacctctcgacgcccgaagtcgcg
aatcatgtagaaaagcagtcggcgcagtttcacgcagacctcaaattctggaaacacgac
ttttcgatatttgccaagggcgttaatgaaagacatctagccaaggaactcatcggctcg
aaggagttttttgacagcgtagagaagtccccgctcacggatgaacaagccaaagcggtt
gtgtgtttcgacaaccgggtcttgctcgtggcttcggcgggctccgggaaaacatcgacc
atggtggccaaggcaggctacgcgctcaagatgggctactgtgaagccgaccgaatgctg
ctattggcgttcaacaatgatgcagccgcagagctcaggcagcggattcaagacagactc
ggccctttggggctgccggcggacaaagttgtcgccaaaaccttccacgcgtttggactg
gacgtcattggcttggctacgggcaagcgcccttccctagcaccctgggttgagaacggc
aaagacctggagcagctgatggccatcgtcgacgacctcaaggaccgggacaccggcttt
cgaatcagctgggaccttttccgagttgtgctgggccaggacctgccaaagtttggcaaa
gaagcacaagcacctgattcttgggacagaaactccaaaaaggaaggctttaggaccctt
aataatgaggttgtgaaaagccgtggtgagcagttgattgccaactggtttttctacaac
ggcgttcggtatgtctacgaaggagcgtatgaggtcgatacggccgatgcgcatcatcgg
caatactacccagacttctacttgcccgatgccaaagcgtatttggagcactgggcactg
gatgccaatggccaagcgccgccagacttcgttggttatcaggaaggtatggaatggaag
aagcaggtccatgctgccaacggtaccaagctgctggagaccacggtcgcgcaactctgg
tcaggcaaggctttcgagtatctgcagactcagcttcaacagcttggtgtgacgctcgag
cccaatccagacaggcctgttccgggcagaaaagcaatagaaaatccgcgacttgcaaaa
accttccgctctttcataacacatgccaaaagcaatcggctcgacctgggagacctcaag
aagcgattggaatcaggcgtcgcaggagatttcaagttcaggcacacgatgtttctgggc
ctgcttgagaagatttggacccaatgggaagctcagctcacaaaggacaaatgcattgac
tttgatgacatgctcaatctcgccacagactgtgtcgagcaggggaaatggaagagcccc
tacgagcttgtaatggtcgatgagtttcaggatgcgagccaagcacgggctcgactggtt
gcaggtttggtgagcggtcccgacaaatgtttgtttgctgtgggtgatgactggcagagc
atcaaccgcttcgcgggggctgacctggcagtcatgactgatttcgaacgccggtatggc
agtgcggtcacgctcaagctggaaaccacctttcgttgcccgcaatcgctgtgcgacatc
agcagtgcatttgttcagaagaacccgaagcagttgcgcaaagccgttcgctcttccaag
cctaacctcgctgaaccagtactcatcattcgggttgacgacgaaagacagattcgagct
gcagtgcaaatgcgccttggggagatttcgcgggaaaacgccacagttggacgaaagccc
aaggttttaatgctgggtagataccaaaaagacaaggcttatttgccttacgcaaacgat
gcgcttgagctggacttcattactgttcactcatccaagggccttgaagctgaccacatc
attttgccgagaatgacctccgagacaatgggctttccaagtcaaatagctgatgacccc
gtgcttttactggcaatgccagggggagatgcgttcgaaaacgccgaggagcggcggctc
ttttatgtcgcgctgaccagagcgcgggccacggtcaccctcatcaccatcacactcaaa
gagtctgcgtttgtgaaggagctggtgagggagcatcagattaccgtgcgcatggccgac
ggcaccgagagctcaaacgagctgtgctcagtatgcggcgacggttttgtggttccaaag
aacggaaaatacggcgctttccttggttgcagcaattatccgagatgcaggcacacccgg
aatattgagcagaatgaagtcagaaatcacagcaggaaacattag

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