Pieris napi (green-veined white): 125048642
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Entry
125048642 CDS
T08706
Name
(RefSeq) splicing factor 3B subunit 3 isoform X1
KO
K12830
splicing factor 3B subunit 3
Organism
pnap
Pieris napi (green-veined white)
Pathway
pnap03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pnap00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125048642
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pnap03021
]
125048642
03041 Spliceosome [BR:
pnap03041
]
125048642
03036 Chromosome and associated proteins [BR:
pnap03036
]
125048642
Transcription machinery [BR:
pnap03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
125048642
Spliceosome [BR:
pnap03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
125048642
Complex B
125048642
Complex C
U2 SnRNP specific factors
125048642
Chromosome and associated proteins [BR:
pnap03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
125048642
TFTC complex
125048642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
GtgE
Motif
Other DBs
NCBI-GeneID:
125048642
NCBI-ProteinID:
XP_047503375
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All DBs
Position
4:4125257..4134219
Genome browser
AA seq
1215 aa
AA seq
DB search
MFLYNLTLQGSSAITHAVHGNFSGTKQQEIAISRGKILELLRPDPNTGKVYTLMKVEIFG
IIRSMMAFRLTGGTKDYIVVGSDSGRIVILEYIPAKNILEKVHQETFGKSGCRRIVPGQY
LAIDPKGRAVMIGATEKQKLVYILNRDAEARLTISSPLEAHKSNTLVYHMVGVDVGFENP
MFACLEIDYEEADSDPTGEAAQKTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLITVPG
GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITIETDEDMVTEIKLKYFDTVPVATSMCVLKTGFLFVACEFGNHYLYQ
IAHLGDEDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDELDSLSPILACQVADLTGEDT
PQVYLACGRGPRSSIRALRHGLEVAEMAVSELPGSPNAVWTVRRHKDDDYDSYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCHALGSDALVQVYPDGIRHIRADKRVNEWKAPG
KKSIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKLSSDVSCMALGSVATGEQ
RAWFLAVGLTDNTVRIISLDPADCLSPRSMQALPASPESLCIVDQPFESGAKSALHLNIG
LSNGVLLRTTLDSVSGDLADTRTRYLGSRPVKLFKVRVQSAEAVLAVSSRTWLGYQYQNR
FHLTPLSYECLEYAAGFSSEQCTEGIVAISSNTLRILALEKLGAVFNQNYVPLEYTPRKF
LINGDTNHIIILETDHNSYTEEMKKQRRVQMAQEMREAAAGGGPEEQQLANEMADAFLSD
ILPENVFSSPKAGAGMWASQIRVVDMSSGEASTLCKVQLEQNEAAVSVCIVRWAVHGEHA
VPHLVVGVAKDMVLSPRTCNEGSLDVYKIYNTGKLELVHKTPVDEYPGALAAFNGRLIAG
VGRMLRLYDIGRRKLLRKCENRHIPNLIVDLKTNRQRIFVSDVQESIFCVKYKKRENQLI
IFADDTNPRWITNTCILDYDTVAMSDKFGNVAIMRLPHSVTDDVDEDPTGNKALWDRGLL
NGASQKGDMVANFHVGETITTLHRATLIPGGSEALLYATLSGSLGVLLPFTSREDHDFFQ
HLEMHMRSENSPLCGRDHLSFRSYYYPVKNVIDGDLCEQFNSLEPSKQKAIAGDLERTPA
EVSKKLEDIRTRYAF
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgttcttgtacaatcttacgctccagggctcctccgccattacccatgccgtacatggg
aatttctctggcaccaagcagcaagagattgctatatcgcgtgggaagatattggaactc
ttgcgtcctgacccgaacactgggaaagtgtatactttgatgaaagttgaaatattcggc
attattcgctccatgatggcatttagattgacgggcggaacaaaagattacattgtggtt
ggatcagattctggaagaattgttatattagagtacataccagctaaaaatattttggaa
aaagtacatcaagaaacatttggtaaatctggttgtaggagaattgttccaggacagtat
ttagcaattgatcctaaagggagagcagtgatgataggtgcaactgagaagcaaaagttg
gtttacattttaaacagagatgcagaagctcgtctgactatttcatctccacttgaggca
cataagtctaacactttggtatatcacatggttggtgttgatgtgggctttgaaaatcct
atgtttgcctgtttggaaattgattatgaagaagcagactctgatcccactggtgaagca
gcacagaaaacacaacagacgcttacattttatgaattagatttgggattaaaccatgtt
gtgcgtaaatattcagagccattggaagagcatgccaacttcctcataactgtgcccggc
ggtaacgatggaccttcaggagtattgatttgttcagaaaactatttaacttacaaaaac
ttaggagaccaacatgacatcagatgtcctatcccccgacgcaggaatgacttggatgac
ccagaacggggaatgattttcgtgtgctctgccactcataaaaccaaatctatgttcttt
ttccttgcacaaacagagcaaggagatatatttaaaatcacaatagaaactgatgaggac
atggtaactgaaattaaactaaaatactttgacacagtacctgttgcaacatctatgtgt
gttttgaagacaggatttctgtttgttgcttgtgaatttggaaaccattacttatatcaa
attgcacacttgggagatgaagatgatgagcctgagtttagttctgctatgcctttagaa
gagggtgacacattcttctttgcaccaagacctctgagaaatttggtacttgttgatgaa
ttggactccctttcgcccattctagcttgtcaagtggctgatttaactggtgaagataca
cctcaggtgtatttagcgtgtggtcgtggcccaagatcttctataagagcattgcgacat
ggtcttgaggtagcagagatggccgtttcagaactaccagggtccccaaatgcagtttgg
actgtacggaggcataaagatgacgattatgattcttacatcattgtgtcgttcgtaaac
gctacgcttgtgctctctatcggcgagactgttgaagaagttacggattccggtttcctg
ggaactactccgacgctcagttgtcacgctctcggcagcgacgctctagtccaagtttac
ccggatggtataagacacattcgcgcagataaaagagttaatgaatggaaagcgccagga
aagaagtctatcgttaaatgcgctgttaaccaacgccaagtcgtcattgctctgactggt
ggagaactggtttactttgaaatggaccctaccggccaacttaatgaatatacagagaga
aagaagttatcgtccgatgtatcctgcatggccctaggatctgtcgctacaggagaacag
agagcctggttcttagcagtgggacttacggacaacactgttagaattatttcattagat
ccagctgactgcctttcgcccagatccatgcaggccttacctgcgagtccagagtccttg
tgtatcgttgatcaaccatttgagtctggcgctaagtctgcattacacttgaatattggt
ctaagcaatggtgtactattaaggacaactttggattctgtcagcggagatttagcagac
acaagaacaaggtatttgggatctcggcctgtgaagttgttcaaagttagagtgcagtcg
gctgaagcagtgctggctgtgtcatctaggacatggcttgggtaccagtatcaaaacaga
ttccaccttacaccactatcctacgaatgtttggaatatgctgccggtttcagttcagaa
caatgtaccgagggtatcgtcgccatctcgtcaaacacattgagaattttggctctagaa
aaattgggagctgtctttaatcaaaattatgtcccactggaatatactccacggaaattt
ttgatcaatggagacaccaatcacattattattttggagactgatcataattcttataca
gaagaaatgaaaaaacagagaagagtccaaatggcccaagagatgcgagaggctgccgct
ggaggtgggccagaagagcaacaattggccaacgaaatggcggacgcgtttttgtctgac
attctcccagaaaatgtattttcttcacccaaagctggggcaggcatgtgggcgtcacaa
atccgcgtagtggacatgagcagcggcgaggcgagcaccttgtgcaaagtgcaactggaa
cagaacgaagccgcagtgtccgtgtgtattgtgcgttgggctgtacacggagaacacgca
gttccacatttggttgttggagtcgccaaggatatggtgctgtctcctaggacttgtaac
gagggcagccttgatgtttataagatatataatacgggtaaattggaattagttcataaa
actccagtagacgaataccccggagcattagctgccttcaatggacgtcttattgctgga
gtaggtcgaatgcttcgtttatacgacattggtcggcggaaacttcttagaaaatgcgaa
aacagacacattcctaacctaattgtagaccttaaaactaataggcaaagaatatttgta
tcggatgtgcaagaatccatattctgtgtaaaatacaagaaaagggagaaccagttaatc
atatttgccgatgatacaaatcctagatggataaccaatacatgtattctcgattatgac
acagtagccatgtcggataagtttgggaatgttgctattatgaggttaccgcactcagtc
actgatgatgtcgatgaggatcctactggaaacaaggctctttgggatagaggtttactg
aatggagcatctcaaaagggagatatggtggccaatttccatgttggggagactataact
accctgcatagagctaccctcattcctggaggttcagaggccctattgtatgctactttg
agtggatccctgggagtccttttacctttcacttcaagggaagaccatgatttcttccaa
cacttggaaatgcatatgcgaagtgaaaattcccctctatgtggcagagatcatttgtcg
tttaggagctactactatccagttaagaatgtgattgacggagacttgtgtgaacaattt
aattcgctggagccgtcgaaacaaaaggcgatcgccggcgacctcgaaaggacgcccgcc
gaggtgtcaaagaaacttgaagatattagaactcgctacgccttctaa
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