Pieris napi (green-veined white): 125048706
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Entry
125048706 CDS
T08706
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
pnap
Pieris napi (green-veined white)
Brite
KEGG Orthology (KO) [BR:
pnap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pnap03021
]
125048706
03036 Chromosome and associated proteins [BR:
pnap03036
]
125048706
Transcription machinery [BR:
pnap03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
125048706
Chromosome and associated proteins [BR:
pnap03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
125048706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
S1
HHH_3
SH2
Spt6_S1
HHH_9
Tex_N
S1_RRP5
OB_RRP5_4th
Motif
Other DBs
NCBI-GeneID:
125048706
NCBI-ProteinID:
XP_047503492
LinkDB
All DBs
Position
4:10588138..10612354
Genome browser
AA seq
1705 aa
AA seq
DB search
MADFLESEAEESELDSEDEKPAERKKPKRKAAVQSDDEDEEEDDDEERLREELKDLIDDA
PIEESGSDGEDSDASVGPKKRKKSDDELDDRLEDEDYDLIEENLGVKVARNKFKRLRRLE
DDDSDNEGNDDPDLEREVIAEKLFVAGSDEEEENRSEPGPAREMEYDDDNEDMESDADDF
IVDDDGRPIAERKKKRKPIFTDASLQEGQDIFGVDFDYDEFEKYGDEDYDEEDEEDLDEY
IEDEEEDGERRRTKKGKAKRPSKKSIFEIYEPSELKRSHFTDLDNEIRKTDIPERMQIRE
VPITPVEEGSTELEDEAEWIYKQAFLKPPVSKADSQEARERSRRGPSTVVKIRQALDFMR
NQTLEVPFIAFYRKEYVQPELSINDLWKVYKYDAKWCQLKQRKENLLKLLENMREFQMDK
VMLNPDAPIPDTMRLIKDEDIERLKNVQTPEELRDVHTHFLLYYSHDLPEMQKVQRGKER
KAEIEEKKKYAREEAEKNGEDPDEAAAAVEAAMPDDEETTEVKYAVRSGPYELCRKAGLE
PLVRKFGLSAEQFAENVRDNYQRHEVEQAAVPPLEAAQEYTPAGGSSGEVLRRAVYMCGV
QLAREPLLRSTLRDTLRERATITVKPTTKGLKMIDESHSCFGLKYLNKKPVRDLTGDQFL
KLTIAAEDKLLDLNISEILEGNTGPSYLEELKQLYQKDEFAATVQAWNDIRIEAVTLALT
KIVMPELRRELQALLLQESKEYVLKCCRRRLYDWLKVAPYESRVSDDDDEEWDASNGVRI
VSIAYVPDRAHCAFACSLVGGGEVADHLRLPHLLYRRNAWDPMERQNKEADLTALRRFIL
RKKPHVIVIGGESREALNIKADVSECIQQLIEDEQFPRIPIEIADNHISKIYSNSIRGRN
DFREYPDILRQAICQARLLQDPLMEISQLCGPDEEILCLRYHPLQDQITKEELLEGIELE
FVNRVNEVGVDVNEAVLTGRGTELLQFVCGLGPRKAQALIKLFKQTNQKLENRTQLVTVC
HMGPKVFINCSGFIKIDTSSLGDSTEAYIEVLDGSRVHPETYEWARKMAVDALEYEDEDA
NPAGALEEILEAPERLKDLDLDAFAEELERQGFGNKSITLYDIRAELNSRYKDLRVSYRS
TTPEEMFDILTKESPETFFVGKMVLASVVGITHRKPQREMLDQANPVRNDETGLWECPFC
HKNDFPELSEVWNHFDAGACPGQATGVRIRLDNGLSGYIHIKNLSDRHVTDPTERVRIGQ
TIHCRVLKIDVERFSVDCSSKSSDLLDKNNEWRPTKDPYYDQETEEKDLRKDKEAKQTKE
RMQYVKRVIVHPSFRNISFAEAEKLMEKMAQGEVIVRPSSKGSDHLTVTWKVAEGICQHI
DVREEGKENAFSLGRSLWIQGSEFEDLDEIIARYVTPMAGHARDLIAYKYYKPLGGMRDK
AEELLKEEKSKNANKIHYVVSAAKNHPGRFLLSYLPRNKCTHEYVSVTPDGYKFRQRMFD
SLGSLLKWFKEHFRDPPPSGTPAQRTPALRTPHGGMTSTMYHTPAAHTPAFHTPAHTPGP
AYINTPYTPSAQTPYMTPFATTPRQPDFLTPVVPRHKQLPVFTEPSDWQKAAEDWVRHRT
VRDTPATPRSSEGMSTPRQSRTPRMDSRSTPRHDMRSTPRHDSRSTPHGHSGRSSRAHSV
RSTPHTNTSPRSMSLGDATPLYDEN
NT seq
5118 nt
NT seq
+upstream
nt +downstream
nt
atggcagactttctcgagtccgaagccgaagaaagcgagttggattctgaagatgagaag
cccgcagaaagaaagaaaccaaaacgcaaagctgctgtacaaagtgacgacgaagatgaa
gaagaggatgatgatgaggaacggcttcgagaggaattaaaagatcttatagatgatgca
ccaatagaagagtctgggagtgatggtgaagattcagatgcaagtgtgggacctaaaaaa
agaaaaaaaagtgacgatgaattagatgataggcttgaagatgaagattatgatttgatt
gaggagaatcttggtgtgaaagttgccaggaataaatttaaacgtctgaggcgattggaa
gatgatgatagtgacaatgaaggaaatgatgatcctgatttagagagagaagtaattgct
gagaagctgttcgttgcaggatctgatgaggaagaagagaatcgttcagaaccaggtcct
gcaagggaaatggaatatgatgatgacaatgaggacatggaatcagatgctgacgacttc
attgttgatgatgatggaagaccaattgcagagagaaagaaaaaacgcaagcctatattc
actgatgcttctcttcaagagggccaagatatatttggggtggactttgactatgatgaa
tttgagaagtatggtgatgaagactatgatgaagaagatgaagaggatttggatgaatat
atagaagacgaggaagaggatggtgaaagacgtagaaccaaaaaaggtaaagctaagcgg
ccaagcaagaagtctatatttgaaatctatgagcctagcgagttaaagagaagtcacttc
actgatttggataatgagatacgtaaaacagacataccggaacgtatgcaaatacgtgaa
gtgcccatcacgcccgtggaagagggtagtactgagttggaggatgaggcagaatggatt
tacaaacaggctttcttgaaaccgcctgtgtccaaggctgattctcaagaggctagggag
agatcaagacgtggcccaagcacagtggtgaaaattcgtcaggctttggactttatgagg
aatcaaacattggaagtcccattcatagccttctatagaaaggagtatgtgcagcctgaa
ttgagtattaacgatctatggaaagtgtataaatatgatgccaagtggtgtcaattaaag
caacgaaaagaaaatctattgaaattgttggagaatatgcgtgaattccaaatggataaa
gtgatgctgaaccccgatgcgcctattccagacactatgagactcatcaaggatgaagat
attgaaaggttaaaaaatgtgcaaacacccgaggaattgcgcgatgttcacacacatttc
ctgctgtactattcgcatgacctacctgaaatgcagaaagtgcaacgcggcaaagagcgg
aaggccgagattgaagagaaaaagaaatatgcccgtgaagaagcagaaaaaaacggcgaa
gatccagatgaggcagcagcggcggtggaggccgcgatgcctgacgatgaagagaccact
gaagtgaagtatgcggttcgatcggggccttatgaactatgcagaaaggctggacttgaa
ccactggtacgcaaattcggtctgtcagccgaacaattcgctgagaacgtgcgtgataac
tatcagagacatgaggtcgaacaagccgctgttccgcctttggaggctgcgcaagaatat
accccagcgggcgggtcttcaggcgaagtgttacgtcgtgctgtgtacatgtgcggggtc
caattggcccgtgagcccctacttcgctctactctgagggacacgttgcgggaaagggcc
actattaccgtaaaacctacaaccaaggggctgaagatgattgatgagagtcactcctgt
tttggtttgaaatacctaaataaaaaaccggttcgcgatttgactggagatcagtttctg
aaactgacgatagctgctgaagacaagttgctggatctcaacatcagcgagattcttgaa
ggcaacactggccccagttatttggaagagttgaagcagttatatcaaaaggacgaattt
gcggcaacggtacaagcctggaacgatattcgaatcgaagcagtcacattggctttgact
aaaattgttatgcccgaattgagacgggagttgcaagctcttctcttgcaggaatcgaag
gaatatgtactaaaatgctgcagacggcggttatatgattggctcaaagtcgctccttat
gaatctcgagtctctgatgacgatgacgaagaatgggatgcgtctaatggtgtacgcata
gtatcgatagcgtacgtaccggaccgtgcgcactgtgcgtttgcgtgttcgttagtggga
ggaggcgaagtcgccgatcatttacgattaccgcacttgttgtatcgccgtaacgcttgg
gatcctatggagaggcaaaacaaagaggccgacctcaccgcacttagaagattcattctc
cgcaaaaagcctcacgtgatagtgatagggggtgagtcgcgtgaggctctcaatatcaaa
gcagacgtgtctgaatgcattcaacagttgattgaggatgagcagtttcccagaatacct
atagagatagcagataaccatattagcaagatttatagtaatagtatacgaggaaggaat
gacttcagggaataccccgacatactgagacaagcgatatgccaagcccgattattacaa
gacccgcttatggagatttcacagctctgtggaccggatgaggaaatactctgccttcgg
taccatcccctacaagaccagatcaccaaagaggagcttctagaaggaatagaactggaa
ttcgtgaacagagtgaatgaagtaggagttgacgtcaacgaagccgtattaacgggtcga
gggacggaactcctccaatttgtatgcggtttaggaccaagaaaagctcaggccctgatc
aaactcttcaaacagaccaatcaaaagctagaaaatcgtacgcaattggtcacagtgtgt
catatggggccgaaagtgttcatcaattgttcgggattcatcaagattgacacaagtagc
cttggtgatagtacagaggcgtatatagaagttctagacgggtcgagagtgcatccggaa
acatatgagtgggcgaggaaaatggcagtggatgccctcgagtatgaagacgaagacgcc
aatcctgcgggagctctggaagagatcctggaggccccagagaggttgaaggatctggat
ctagatgcgtttgccgaggagttggaaagacagggtttcggtaataagagtatcacgctg
tatgacattcgagcggagttaaattctaggtacaaagatctcagagtttcatacagatca
acgactcctgaagagatgttcgatatcctaaccaaagaatcgccggaaacctttttcgtg
ggaaagatggtattggccagtgtggtcggaatcactcacagaaaacctcaaagggagatg
ttggatcaggccaatcctgtgaggaatgacgagacaggtctttgggagtgtcccttctgt
cataagaatgattttcctgagctctctgaggtatggaatcacttcgacgcgggcgcgtgt
ccgggtcaagcgacgggcgtacgtatacgtctcgataacggactttccggatacatacat
atcaagaacttatcggaccgacacgtaacagatccgacggaacgcgtacgaattggacag
acgatacattgtcgagtgctcaagatagatgtcgaacgattctcggtcgattgctcttct
aagtcgtccgatttgctcgataagaataacgagtggagaccaacgaaagatccctactac
gatcaagaaacagaagagaaagacttgcgaaaggataaagaggcgaagcaaactaaagag
agaatgcaatacgtgaaaagagtaatagtgcacccatcatttagaaatatatcttttgcc
gaagcagaaaaacttatggagaaaatggcccaaggagaagttattgtgaggcccagtagt
aagggatctgaccatctcacggtgacgtggaaggtagcggagggcatttgccaacatatt
gatgtacgagaggaaggcaaagaaaatgcgttttcgttaggtcgcagtctctggatacag
ggttcagaattcgaagacttagatgaaattatagctagatatgtaactccaatggccggt
cacgcgcgagatctcattgcctacaaatactacaaacctttaggcggcatgcgagacaag
gccgaagagttgctcaaagaagaaaaatctaaaaacgctaataaaatccactacgtggtc
tcggcagccaagaatcatcccggcagattccttctctcttacctgccgcgaaataaatgt
acgcacgagtacgtatcggtcacgccagatggatacaaattcagacagagaatgttcgat
tcgctcggaagtctcttaaaatggttcaaagaacacttcagagatccacccccaagtggt
acaccagcgcagaggacgccagctctgcgcacaccacacggcgggatgacgtctacgatg
tatcacacacccgccgctcacacgccggccttccacactccagcgcacacacccggcccg
gcatacattaacaccccatacaccccatcagctcaaacaccttacatgacaccgttcgcc
accactcccaggcagccagacttcctaacgccagtcgtaccgcgacacaagcagcttcca
gtattcacggagccgtcggactggcaaaaggctgccgaagactgggttagacatcgaacc
gttagagacacccctgcaacccctcgtagcagcgaaggtatgtcgaccccgcgacagtct
cgcacgcccagaatggactcgagatcaaccccccgacatgacatgaggtctacacccaga
cacgactccaggagtacaccccacggtcactctggaaggtcgtccagggcacactcggtg
cgttccaccccccacacaaatacgtcacccaggtcgatgtctctcggtgacgcgacaccg
ctctatgacgagaactag
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integrated database retrieval system
