Pieris napi (green-veined white): 125048782
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Entry
125048782 CDS
T08706
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
pnap
Pieris napi (green-veined white)
Pathway
pnap03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pnap00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
125048782
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pnap03021
]
125048782
Enzymes [BR:
pnap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
125048782
Transcription machinery [BR:
pnap03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
125048782
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Nop14
Motif
Other DBs
NCBI-GeneID:
125048782
NCBI-ProteinID:
XP_047503618
LinkDB
All DBs
Position
4:complement(7299565..7305090)
Genome browser
AA seq
1648 aa
AA seq
DB search
MNVDINLSSALKGLVSVDPESVQFLTFSDEDVKQLSVVKITNSQSFDSLGNATRGGLYDP
LMGPIRDRNDECATCGNILLNCPGHFGHIELPLVVANPLYIKNMYILFRTSCLKCYKIQL
DDKLRFILKLQLDLLDAGHVTAALDLENFLIDMKDKSASPDKPHKTIRKYQKLLKKTDPV
TKTFQNKNIDKQRGKVINHYFKAINTLKTCIFCRNRLIKVTTSDNKIMYNTSAESGTKGG
SIKIMMPDELQQICASIAENNEDVLMYCLPILKYSKVKPITDIFFMKVLPVLPINVRPCN
VLRGEIMENPQSKVYQAILKRSLSARVILQIMKSTDQSKTIGQLNTELRQAYESSPGASP
AEKLHTCWQELQRNVNEILNCEGAGVVSQGLKQVLEKKQGVIRMHMMGKRVNFAARSVIT
PDPNLDIDEIGIPDAFATKLTYPVPVTEWNVHELRKMVINGPNVHPGAEKIEIRNGRTIR
IPPDCINKRKSLAKRLLTPEEYKKSDLKIVHRHLINGDVLILNRQPSLHKPSMMAHRARI
LKGEKTIRLHYANCKSYNADFDGDEMNAHFPQNEIARSEAYNIMSVRKQYLVPKDGTPLS
GLIQDHVISGVRMSLRGTFFSKADYQQLVFQALSSHRGEIKLLPPTILKPVLLWSGKQVL
STIIINSIPKGKPYLSLVGKAKIGDKAWQKVPARTWVAGGTQLEINDLSEAQVIIRKGEL
LCGVLDKTHYGATPYGLVHCMYELYGGDSSTALLSSFSKVFTFYLQWIGFTLGVKDILVV
EEANKKRDEIVQLVRQIGKVAAVKATDLPADVDDNVLKETIGELLAKDPKFRANLDRQYK
NMLDSYTNNINTVCLSQGLLEKFPSNNLQLMVQSGAKGSTVNTMQISCLLGQIELEGKRP
PLMISGRSLPSFPPYEVSPRAGGFIDGRFMTGIQPQEFFFHCMAGREGLIDTAVKTSRSG
YLQRCLIKHLEGLSVAYDHTVRDADGSVIQFAFGEDGLDVLKCQYLKHSQLPFLDINSNA
VVGKSVIKKLKEDDDIKVVAKAQKSLKKWKKRHGNPTDKEKSNGFALFSIQTKKDIKLHE
MPTDRTRDPYYWELETMWRSLDEDEKAQYTRKRCPDPIPSKMSPEYKFGVINEQLDGVIQ
NYLKNRNKNIFNEYTDNDKFGEVMNAKYLASMAAPGEPVGILAAQSIGEPSTQMTLNTFH
FAGRGDMNVTLGIPRLREILMTASVNVKTPNMDIPFYGNISGLTQKAEKLRKKMNRVTVS
DVLEKIDIECEIVTQPDRKLKTIMRFFFLPYNQYKTQYSVKPSQIIKHMQKKFFTEMFTI
IRKQAKGNSGIAWSTEKKKKKKVSSDDEDDDPQDEPVKKPVNIDDSSDEDGPNDDDDNTE
VKLRNKRAEEQEYEDPESDEEEKSDEEVENDDESVKELDDTESISVADSKAMADVVERIS
HATNYIFDTKNHQWCELTVLFPISFLRIDLTQALREAAKKSVIYEIKNIKRAITNTEKGV
LFLKTEGINIVQMFKYNDLLDLNKLYSNDIHAIANTYGIEAANKVIIKEIQNVFNVYGIE
VDPRHLSLIADYMTYNGIFEPMSRKGMEASSSPLQQMSFESSLIFLKEAVLNAKVDNLRS
ASSCLMLGQPCRSGTGAFSLQLCSKVIS
NT seq
4947 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtggatataaatttatcttcggctttaaagggactagtgtcggttgaccctgaa
tctgttcaatttcttacattctctgatgaggatgttaaacaacttagtgttgtaaaaata
accaactctcagtcttttgattccttaggcaatgccacacgaggaggtctctatgaccct
ttgatgggaccaataagagatagaaatgatgaatgtgctacttgtggaaacattttgtta
aactgtcctggccattttggacatattgagctacctttggtagtagctaatccactttat
attaaaaatatgtacatcttattccgtacttcttgcttgaaatgctacaaaattcagctt
gatgataaactgagatttattcttaaattacaattagatcttctggatgctggacatgtt
acagctgctttggatcttgaaaattttttgattgatatgaaagataagtctgcctctcca
gataaaccacacaaaacaattcgaaaatatcagaaactgcttaaaaagacagatccagta
acaaagacatttcaaaataagaacattgataaacaaagaggtaaagtaataaatcattat
ttcaaagcaataaatactttaaaaacttgtattttctgtagaaaccgattaatcaaagtt
acaacttcagataataaaataatgtataatacaagtgcagaaagtggcactaaaggtggc
agtataaaaataatgatgccagatgaattgcaacaaatttgtgcttcaatagcagaaaat
aatgaagatgttttgatgtactgtctacctatattaaaatattcaaaagtaaaaccaatt
actgatatatttttcatgaaagttttgccagtcttgccaattaatgtgagaccttgcaat
gtattacggggcgaaattatggaaaacccccaaagcaaagtatatcaagctattttgaaa
aggtctctatcagctcgagttatccttcaaattatgaaatcaacagatcaaagcaaaact
attggccaattgaatacagagttaaggcaggcttatgaatcttcacctggggcatctcca
gctgagaaattacacacctgttggcaagaacttcagagaaatgtaaatgaaatactaaat
tgtgaaggtgcaggggttgtgtctcaaggattaaagcaggttttagaaaaaaaacagggg
gtcattagaatgcatatgatgggtaaaagagtaaattttgcagctcgctctgtcattact
cctgatcctaacttagatatagatgaaattggtatccctgatgcttttgctacaaaatta
acttatccagtaccagttactgaatggaatgttcatgagttgagaaaaatggtaattaat
ggtcctaatgtacatccaggtgctgaaaaaatagagattagaaatggcaggacaatacga
atcccaccagattgtataaataaaaggaaaagtcttgctaagcggttactcactccagaa
gaatataagaaaagtgacctgaagattgttcacaggcatttaatcaatggtgatgtatta
atattgaaccgtcaaccgtctctacataaacctagtatgatggcacatagggctagaata
ctaaaaggagaaaagactattcgattacattatgctaattgtaaatcctacaatgctgat
ttcgatggtgatgaaatgaatgcacattttccacaaaatgaaattgcaaggagtgaagca
tataatattatgtcagttcgaaagcaatatttagtaccaaaagatggtacaccactaagt
ggtttgattcaagatcatgttatttctggggtgcgaatgtctttacgtggcacatttttt
tctaaggcagattatcaacaattagtgtttcaagctttatctagccatagaggtgaaata
aaactactgcctccaaccatcttaaaaccagtattattatggtcagggaaacaggttctt
tcaacaataataataaatagcataccaaagggtaaaccatatttatcattagtaggaaaa
gcaaaaattggtgataaggcttggcaaaaggtaccagctaggacttgggttgcaggaggt
acacaacttgaaatcaatgatttgtcagaggcacaagtaattattcgaaaaggagaactt
ttatgtggtgttttagataaaacccattatggtgcaactccatatggtttagttcactgt
atgtatgagttatatggcggtgattcctcaacagcattactcagttccttctcaaaagtt
tttacattctaccttcagtggattgggtttactttgggtgtcaaagatattttggttgtt
gaagaagctaataaaaagagagatgaaatagtgcaactcgtaaggcagattggtaaagtt
gctgcagtaaaagccactgatctgccagcagatgttgatgacaatgtacttaaagaaact
attggagaattattggctaaagatcctaaatttcgtgctaatcttgatagacaatataag
aatatgcttgattcatacactaataatattaacactgtttgtttatctcaaggtttgtta
gagaaatttccatcaaataatcttcaattgatggtacagtctggtgccaaaggttccaca
gttaatactatgcagatttcttgcttgcttgggcaaattgagttggaaggtaaaaggccc
ccattaatgatatctggtagatctttgcccagttttcctccttatgaagtttcaccaaga
gcgggaggatttatagatggtcgctttatgacaggcattcaacctcaggaattttttttc
cactgcatggctggtcgtgaaggtcttattgacacagctgtgaaaactagtcgttcaggc
tatttacaaaggtgccttataaaacatttagaaggtttgagtgttgcgtatgatcatacc
gtacgtgacgctgatggaagtgtgatacaatttgcgtttggtgaagatggactagatgta
ttaaaatgccaatatttaaaacacagccaattaccattccttgacataaactccaatgca
gtagttgggaaatcagttattaaaaaacttaaggaagatgatgacattaaagtagtagcc
aaagctcaaaaatctttaaaaaagtggaagaaaagacatgggaatcctacagataaagag
aaatcaaacgggtttgcacttttttctattcagaccaagaaagatatcaaacttcacgaa
atgccgactgaccgaacacgtgatccctattattgggaattagaaactatgtggagatca
ttagatgaagatgagaaggcacagtacaccagaaaacgttgtccagatccaatcccaagt
aaaatgtccccagaatataaattcggtgttataaatgaacaattagatggcgttattcaa
aactacttaaaaaatcgcaataaaaacatattcaacgagtacactgacaatgataaattc
ggcgaagttatgaatgcaaaatatctagcatctatggcagcaccaggagaacctgttggc
atattagctgctcaatctattggagaaccttcaacgcagatgacattgaatactttccat
tttgccggtagaggagacatgaacgtaacactgggtattccgcgtctcagagaaattctt
atgacagcttcggtaaatgttaaaactcctaatatggatataccattctacggaaatata
tcaggcttgacccaaaaagcagaaaaactacgaaagaaaatgaaccgcgttactgtatcc
gatgtactagagaaaatagatatagaatgcgaaatcgttacgcagcctgacaggaaattg
aagacaattatgaggtttttcttccttccatacaatcaatataaaactcagtactcggtg
aaaccatcgcaaataataaagcatatgcaaaagaaatttttcacagaaatgtttacaatt
atccgtaaacaagccaagggtaatagtggaattgcttggtctactgaaaaaaagaaaaaa
aagaaggtttcgagtgatgatgaagatgatgaccctcaggatgaaccagtaaagaagcct
gttaatattgatgacagttcagatgaagatggcccaaatgatgatgatgataatacagag
gtaaagcttcgaaataagcgtgctgaagaacaagaatatgaagatccagaatcagatgaa
gaggagaaatctgatgaagaagttgaaaatgacgacgaaagtgttaaagaacttgatgat
acagaaagcatctctgttgcggacagcaaagcaatggctgatgtcgtggagcgaattagt
catgcgaccaattatatattcgacaccaaaaaccaccaatggtgtgaactaactgttctc
tttcctatatccttccttcgaattgatcttacacaagcattgcgtgaagctgctaaaaaa
tcggttatttacgaaatcaagaacattaagcgagcaattactaatactgaaaaaggagtt
ttatttttaaagactgaaggaataaatatcgtgcaaatgttcaaatacaatgatttgctg
gatttgaataaactctacagtaatgacattcatgcaatagccaatacatacggaatagag
gcagcgaataaagttataattaaagaaatccaaaacgtatttaatgtatatggcattgaa
gttgacccgcgacatttgtcactgatagcggattatatgacttacaatggaatctttgag
cccatgagtcgtaaaggtatggaggcatcatcatcgcccctacagcaaatgtcatttgaa
tcatcacttatatttttgaaggaggcagttctaaatgctaaagtagataatttgcgttca
gcgtctagctgtcttatgttaggacaaccgtgtcgcagtggaacaggtgcttttagttta
caactttgtagtaaagttataagttaa
DBGET
integrated database retrieval system
