Pieris napi (green-veined white): 125048804
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Entry
125048804 CDS
T08706
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
pnap
Pieris napi (green-veined white)
Pathway
pnap03022
Basal transcription factors
pnap03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pnap00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125048804
09124 Replication and repair
03420 Nucleotide excision repair
125048804
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pnap03021
]
125048804
03400 DNA repair and recombination proteins [BR:
pnap03400
]
125048804
Transcription machinery [BR:
pnap03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
125048804
DNA repair and recombination proteins [BR:
pnap03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
125048804
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
DZR
zf-RING_4
Zn_ribbon_GTF2H2
HscB_4_cys
Motif
Other DBs
NCBI-GeneID:
125048804
NCBI-ProteinID:
XP_047503667
LinkDB
All DBs
Position
4:9422411..9425931
Genome browser
AA seq
400 aa
AA seq
DB search
MADDEQDPKEYRWETGYEKTWEAIKEDEDGLVEGLVAEFAQKAARKAVTQRRGPVRLGMM
RHLLVAIDCSEAMSSQDLKPTRFLCTLKLLEKFIEEFFDQNPLSQLGLVTMKNKRAEKIS
ELSGNVRKHIKVVQGLSNMSLTGEPSLQNTLELAGRVLKPLPAHASRELLVLFASLTTCD
PGDISVTVQNLKNEGIRCSVIGLAAEVRICKKLCQDTGGEYGVVLDDIHYRSLLLEQTSP
PPRARALDAGLVKMGFPHSAPPSTQSDTEPPITVCMCHIEEGEGVGGEGHLCPQCRSKYC
SLPAQCRTCGLTLASAPHLARSYHHLFPVDPFEELKNEGQSQFCFACVRSFTDTDKQIYR
CNRCLEHYCWECESMISTTLHVCPGCASRPHLYQRLPDTA
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgatgaacaagatcccaaagaatatagatgggaaacaggttatgaaaaaact
tgggaagcgataaaagaagatgaagatggattggtggaggggcttgtggctgaatttgct
caaaaagcagcgagaaaagccgttactcaacgccgaggaccagttcggctgggtatgatg
aggcatctacttgttgccattgactgttctgaagctatgagctcacaggacttgaaaccg
actagatttctttgcacattgaagttgttggaaaaattcatagaagaattctttgaccag
aatcctttgagccaactaggcttggttactatgaaaaataaaagggcagaaaaaatcagt
gagctatcagggaatgtgaggaaacatattaaggtggtacaaggattgtccaacatgtca
ttaaccggggagccatcactacagaatactttggaacttgctggccgagtccttaaacca
ctgcctgcgcatgcttcacgggaattattagttttatttgcatcacttacaacatgtgat
cctggtgatataagtgttactgtacagaacctgaagaatgaaggaataagatgctctgtg
ataggattggctgctgaagttagaatatgcaagaaattatgccaggacactggtggagaa
tatggtgtggtattagatgacatccattaccgttctctcctactagaacaaacatcaccg
ccaccgcgcgcccgtgcactggacgccggcttggtcaaaatgggcttcccacactctgct
ccaccctccactcagtctgatacagagccaccaatcactgtctgcatgtgccacattgaa
gaaggtgaaggtgtaggaggtgaaggccatctatgtccacagtgtcgtagcaaatactgt
tcactacctgcacagtgtcggacctgtggactgacactagcatcagcaccacatcttgca
agatcatatcatcatctgtttcctgttgatccatttgaggaattaaaaaatgaaggacaa
agtcaattctgttttgcatgtgtaagatctttcacagatactgataagcagatatatcgg
tgtaaccgttgtctggagcattattgttgggaatgtgagagcatgatatcgacaacacta
catgtctgccccggatgtgcttctcgccctcacctctatcaacggttaccagatacagct
tga
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