Pieris napi (green-veined white): 125048836
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Entry
125048836 CDS
T08706
Name
(RefSeq) mismatch repair endonuclease PMS2 isoform X1
KO
K10858
DNA mismatch repair protein PMS2
Organism
pnap
Pieris napi (green-veined white)
Pathway
pnap03430
Mismatch repair
pnap03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pnap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
125048836
03460 Fanconi anemia pathway
125048836
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnap03400
]
125048836
DNA repair and recombination proteins [BR:
pnap03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
125048836
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
ExsD
Motif
Other DBs
NCBI-GeneID:
125048836
NCBI-ProteinID:
XP_047503710
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Position
4:complement(4174108..4181512)
Genome browser
AA seq
875 aa
AA seq
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MNQENIKPINKDTVHKICSGQVVLSLAVAVKELLENSLDAGATNVDIRFKNYGVDLIEVS
DNGTGVTEDNMAALTLQYHTSKLNDYSDLLGVTSFGFRGEALSSLCSLANLTIITRHQTS
SYATKIQYDNKGKILSKTPCSRQIGTTVTLTNLFSSLPVRQKEFHKNSKREFNKMTNLLY
AYCLISKGVKITCSNQTQSNTKSVVVATTGSQSYKDNIASVFGHKQIQSLLEINTEIVSN
IKENIFKGLSAEVKEHNETIEIDDVEIDLSEDSNDADANKTHNNQSDSFSLSQKSQGYKN
IPSPVELEGFISSCEHGSGRSSTDRQLYYVNSRPCEPTKIIKLVNEVYKQYNSNQYPFVF
LNIIIDRDAVDVNVTPDKRKVFLTKEKAILDVVKASLIKLFENIPNTLKLNSTFSEDQSK
VLVPNLSQPRIFNSFIQQFNKNKEIITDLSEISEKNKSNDLKRKLPTNLDSFISKIKRSH
ETDDKKNDHEIPINNELSEASSNSNSPNATLKQDIDYVEATPSSSETSNDNVQDYKKHSD
FIEVVTTNGPENKDNLITKDIIYLESTEKLPATQILTLSNVITKDLHTIYCKTKDPNKKT
SKEKMEEIKTFDNKKVKTDHNDLGKTSRPFVTFKTSLEQVKCLTEIYNKKSKKQLPERIK
FNSRIDPVFNKKCEEELNREISKHSFKQMQVIGQFNLGFIITRLDDDLFIIDQHATDEIY
NFETLQKTTELTSQKLVIPQQLELTGVNEQILMDNLDIFKKNGFTFDIEENAPITKRVKL
LTLPMSKNWIFGKDDIEELLFMLKESPSEYCRPSRVRAMFASRACRKSVMIGTALSKADM
RQLVDHMAEIDKPWNCPHGRPTIRHLVNLAMVHTC
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaagaaaatataaaacccataaacaaagatacggtgcataaaatatgttctggg
caggttgttcttagcttagcggttgctgtgaaagagcttttagaaaattctctggatgct
ggggcaacaaatgttgatattcgttttaagaactatggtgtagatcttatagaagtttct
gacaatggtactggagtaactgaagataatatggctgcattaacactacaatatcatact
tcaaagttaaatgactactcagatctacttggagttactagctttggcttcagaggagaa
gctttgagctctctttgttcattggcaaatcttacaattatcactagacatcaaacaagt
agctatgcaactaaaatacagtatgataacaaaggtaaaattttaagtaaaacaccatgc
tcaagacaaataggaactacggtcacattaacaaatctgttttcctctctacctgtaaga
caaaaggaatttcataaaaactctaaaagggaatttaataagatgactaacttattgtat
gcatactgtcttatatcaaaaggagttaaaatcacttgcagtaatcagacacaatcaaac
acaaaatcagttgtagtagcaactacaggttcacaatcatataaagacaacatagcatct
gtctttggtcataaacaaattcagagtttacttgaaattaatacagaaattgtatctaac
atcaaagaaaacatatttaagggcttatcagctgaagtgaaagaacataatgaaacaatt
gaaatagatgatgttgaaattgatttatctgaagattctaatgatgctgatgcaaataaa
actcacaataatcagagtgatagcttttctttatcacaaaaatcacaaggatataaaaat
attccaagcccagttgaattggaggggtttatatcttcatgcgaacatggaagtggaagg
tctagtacagatagacaattgtattatgtcaattctaggccatgtgagccaacaaaaatt
attaaactagtcaatgaagtatataaacagtataattcaaatcaatatccatttgtgttt
ctaaatataattatagatagagatgctgttgacgtcaatgtaactccagataagagaaaa
gtatttcttactaaggaaaaggccattttggatgttgtaaaggcatctttaataaaactt
tttgagaatatccctaatacactaaaattaaattccacttttagtgaagaccaatctaaa
gtgttagtgcctaatttaagccaacctagaatctttaattcctttatacaacaatttaat
aaaaataaagaaataattactgatttgtctgaaatatctgaaaagaataaatccaatgat
ttaaaaagaaaattaccaacaaatttggacagttttatatcaaaaataaagagaagtcat
gaaactgatgataaaaagaatgatcatgaaataccaattaataatgaacttagcgaagca
agttcaaacagtaattctcccaatgccacactaaaacaggatatagactatgttgaagcc
accccatcttcatcagaaacatcaaatgataatgtacaggattataagaaacattcagat
tttatagaagtagttactactaacggacccgaaaataaagataatctaataacgaaagat
ataatttatttagaatctacagaaaaattaccagcaacacaaattttaacactatcaaat
gtgataacaaaagatttgcatacaatatactgcaaaacaaaagatcccaataagaaaact
tctaaagagaaaatggaagaaataaaaacttttgataataaaaaagtgaaaacggaccac
aatgacttgggaaaaacatctagaccatttgttacctttaaaacatctttggaacaggtt
aaatgcttaactgaaatttataacaagaaaagcaaaaagcaattacccgaaagaataaaa
tttaatagccgcattgatcctgtgtttaataaaaaatgtgaagaagaattaaatagggaa
atatctaaacattcatttaaacagatgcaagtgattggtcaatttaatctaggatttatc
attacccgcttagatgatgaccttttcatcatcgaccagcatgctaccgatgagatttat
aattttgagaccttacagaaaacaactgaactcacaagtcaaaaattggttatccctcaa
cagcttgagctcactggtgtcaatgagcaaatattaatggataatttagacatatttaaa
aaaaacggatttacttttgatatcgaagaaaacgctcctataaccaaaagagttaaatta
ttaacattaccaatgtctaagaactggatatttggcaaggatgatattgaagagctttta
ttcatgctaaaggaatctccatcagaatactgtaggcctagcagagtaagagcaatgttc
gcgtcgcgagcttgcagaaagtctgtcatgataggcacagctcttagcaaggcggatatg
agacagttggtcgatcacatggcagaaatcgacaagccctggaattgtccgcacgggagg
ccaacaatacgccatttggttaatttggctatggtgcatacttgctaa
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