Pieris napi (green-veined white): 125048967
Help
Entry
125048967 CDS
T08706
Name
(RefSeq) ATP-dependent RNA helicase DDX42
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
pnap
Pieris napi (green-veined white)
Pathway
pnap03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pnap00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125048967
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pnap03041
]
125048967
Enzymes [BR:
pnap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125048967
Spliceosome [BR:
pnap03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
125048967
Complex B
125048967
Complex C
U2 SnRNP specific factors
125048967
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
125048967
NCBI-ProteinID:
XP_047503906
LinkDB
All DBs
Position
4:complement(13167834..13175846)
Genome browser
AA seq
743 aa
AA seq
DB search
MSGSGKGLGFAGFTMPKRNPSTVSLHAVPPPTASLNNVPPPSSGLSKQGYSTMNAITQNA
MTGNFGTLGKKRAKTEDEYFDDDDEPPTPALAYIPAPGSPTNDMAKENNDEVDPLDAYMA
GLEQQAAKDLMTSKENEATGKGDVARGTRGDIDDMDDEESYYKYMEDNPLTAADDGSDVE
IEYDEDGNPIPPPKKKFIDPLPPIDHSEIQYETFEKNFYTPHEDIEKLTNEQVEELKNNL
GVKISGPEPPRPVSSFAHLGFDEQLMKAIRRSEYSQPTPIQAAGVPAALAGRDLIGIART
GSGKTAAFLWPLLVHIMDQKELAPGDGPIGLILAPTRELAQQIYMEAKRFGKVYNIRCVC
CYGGGSKWEQTKALEGGAEIIVGTPGRVIDLVKCKATDLGRVTYLVLDEADRMFDMGFEP
QVRSICNHVRPERQALLFSATFPRRVEKLARDALHDPVRVQHGAAGEACHLVTQHVRIFH
RPEEKWPWLLQNLVEFLSAGSVLIFVTKKLDAEQTAANLGVQQYDALLLHGDMDQADRNK
VITAFKRQEQNILVATDVAARGLDIPHIRTVINYTVARDIDTHTHRVGRTGRAGVRGDAY
TLLAKQTDKEFAGHLLRNLEGAQQEVPEELTQLAMQSAWFRKSRFKKGKGKNLNIGGCGL
GYKERPGLPNISEEPVVNVPAGGPATDRLASLKQAFRSQYNKFTASTDHSWEQTRPVLQP
GVNAPAAQEEKRVRKGGKKSRWE
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtagcggcaaaggtttaggcttcgccggatttactatgcctaagcgcaatcca
tcaactgtttctttgcacgctgttccgccccccacagcgtctttgaacaatgttccaccc
ccatcatcggggctttctaagcaaggctactcgactatgaatgcaatcactcaaaatgct
atgacaggaaattttggtactttgggaaaaaaacgcgcaaaaacagaggatgaatatttt
gatgatgatgatgaacccccaacacctgctctagcttatatcccagctccaggaagtcct
accaatgatatggctaaagagaataatgatgaagtagatccattggatgcttacatggct
ggcttagaacaacaagcagctaaggatttgatgaccagtaaagagaatgaggcaacaggc
aagggggatgtcgcaagaggaactagaggagacatagatgatatggatgatgaagaaagc
tactacaaatatatggaagacaatccgctaacagcagctgatgatggttcagatgtagaa
attgaatatgacgaggatggtaaccctattccacctccaaagaagaagtttatagatccc
cttccaccaatagaccactctgaaattcagtatgagacatttgaaaagaatttctataca
ccacatgaagatattgagaaattgaccaatgaacaggttgaggaattgaaaaataattta
ggtgtcaagatttcagggcctgagccaccgagaccagtgagcagttttgcacatttgggt
ttcgatgagcaacttatgaaagcgattcgtcgctcagaatattctcagcccactcccata
caagctgctggagtaccggccgcacttgccggccgagatcttattggtattgcgcgtact
ggttcaggaaaaactgcagcatttctttggccgttattggtacatattatggatcagaaa
gagttggcacctggggatgggccaattgggcttatcttggcacccactcgagagttggct
caacagatatatatggaggcgaaacgatttggaaaagtatacaacatacgatgtgtatgt
tgttacggtggtggatcgaaatgggaacaaaccaaagctttagaaggtggtgctgaaata
attgtgggtacgccggggagagttatagatttagttaaatgtaaagcaacggatttgggt
cgagttacatatctggtcctcgatgaagctgacagaatgtttgatatgggatttgagcca
caagtccgttcgatatgcaaccacgtgcggccggagaggcaggcgttgctgttctctgcg
acgtttccacggcgagttgagaagttggcccgagacgcgttacacgatcccgtccgagtg
caacacggcgccgcgggagaggcctgccatcttgtcacgcaacatgtccgcatattccat
aggccagaggagaaatggccttggttacttcaaaatcttgttgaatttttatcagctggc
agtgttttgatatttgtcacgaaaaagttagatgcagaacagacagcggcaaatcttggc
gtgcagcaatatgatgcgttattgctgcacggagatatggaccaagcggacaggaataag
gtcatcacggcgtttaaacgccaagaacaaaatattctagtcgccaccgatgttgcggct
cgtggtttggacatcccacacattcgtacagtgataaattacacggtagcgagggacata
gacacgcacacgcaccgtgtgggacgaactggacgtgcgggtgtacgcggagatgcgtac
acgctgctggcgaagcagactgataaagagtttgctggacatttgttgaggaatttggaa
ggagcacagcaggaagttccagaagagttaacacaattagcgatgcagtcagcgtggttc
agaaaatcccgcttcaagaagggaaagggaaagaatttgaacatagggggctgtggattg
gggtacaaggaaaggcctggcctaccaaatatcagcgaggagcccgtagtgaacgtccca
gccggtggcccagccacagatcgcctcgcttcgctcaaacaggccttccgatcgcagtat
aataaattcacagcatcaacagaccactcgtgggagcaaacgcgtcccgtgctccaaccc
ggggtgaatgcccctgccgcacaagaagagaagagagtgagaaagggtgggaagaagagc
cgctgggaatga
DBGET
integrated database retrieval system
