Pieris napi (green-veined white): 125049010
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Entry
125049010 CDS
T08706
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pnap
Pieris napi (green-veined white)
Pathway
pnap03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pnap00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125049010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pnap03041
]
125049010
03009 Ribosome biogenesis [BR:
pnap03009
]
125049010
Enzymes [BR:
pnap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125049010
Spliceosome [BR:
pnap03041
]
Complex A
U1 snRNP components
U1 related factors
125049010
Complex B
125049010
Ribosome biogenesis [BR:
pnap03009
]
Eukaryotic type
Pre-60S particles
Helicases
125049010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
125049010
NCBI-ProteinID:
XP_047503960
EnsemblRapid:
ENSPNPG00015042297
LinkDB
All DBs
Position
4:5424876..5431567
Genome browser
AA seq
825 aa
AA seq
DB search
MQYNSFHNQHPIFRPRLDQNEQFGKMPYLNRMYEFGGPKNFAPRNNMGNKNFRPRNDFNG
VRPDFNANRNDDFGGPKEYRPRNNYNNQNMQKKNEYDGDNASGSNNMQFYNSKNDFGGPK
PSFQKNNFGPKNYNNPNGSPTNAQQQQYMQKKAYNSNTSGQTQDFNDRKLQSRKAKHPGD
GLVKPVWDMGQLEEIEKNFYKPHANVDARSEEEVQLFRSTKEITVSGNNIPRPNQKFDEG
NFPDHILNTIKEQGYEDPTGIQAQGWPIALSGRDMVGIASTGSGKTLAYMLPAAVHIVHQ
QRIQRGDGPIALILAPTRELAQQIQSVAQAYSARGCIRNTCLFGGSPKGPQARDLERGVE
IVIATPGRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWS
ATWPKEIQALAEDFLTDYIKVNIGSLNLSANNNIKQIIEVCEEHEKEAKLSNLLKEIASE
KDNKVIVFVETKKKVDDIARAVRRNGYKALAIHGDKSQPERDAVLTEFRNGSTTILIATD
VAARGLDVEDVKFVVNFDYPNSSEDYIHRIGRTGRCQQSGTAYTYFTSGDARQARALVGV
LKETGQNPPTKLNDMARNNNNSSGRNRWQQRKENNSGSSSPRQKSNQWNNKMASGGSDDG
QNSIQTHTFTQQPPRFSNQTQNNQGYRQNNYQKTVPFPSPNVFDSMGTYQGGYNNGYQNA
YNNQNGYGQRPYNNTRNNGQQYRNNNAGGNKSSGSGSSFGSPPPHYAPAHYPQMHPHHQE
MLGGKFYGGGVGGGGPCGYQAAVGGGVPYPHLPPGPLLYAAPVQQ
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgcagtacaacagctttcacaatcaacacccaattttcaggcctcggttagatcagaat
gaacaattcggtaagatgccttatctcaatcgaatgtacgagtttggaggacctaagaac
tttgctcctaggaacaacatgggcaacaaaaattttagacccagaaatgattttaatgga
gtgagaccagattttaatgctaaccgcaatgatgattttggggggcctaaggaatatagg
ccaagaaataactataataatcaaaacatgcaaaagaaaaatgagtatgatggagataat
gcttcaggcagtaataatatgcaattttataattctaaaaatgattttgggggacccaaa
ccaagcttccagaagaataactttggacctaaaaactacaataatccaaatggatcacct
actaatgcccagcagcaacagtatatgcaaaagaaagcatataactctaacaccagtggg
caaacacaagactttaatgatcgtaaactacaaagtcgcaaagctaaacacccaggtgat
gggctagttaagcctgtatgggacatggggcagcttgaagaaattgagaagaatttctat
aaacctcatgctaatgtagatgcccgttctgaagaggaagtccaactatttagatcaaca
aaagaaataactgttagtggtaataatatacctcgaccaaaccaaaagtttgatgaaggt
aatttccctgaccacattctaaacactatcaaagaacagggttatgaagatcctactggt
attcaggcacaaggatggcctattgctttatctggtcgtgatatggttggtatagcatct
actggttcaggaaaaacccttgcttatatgttacctgctgctgttcacattgtacatcaa
caaaggatccagagaggtgatggtccaattgccttaattctggctccgacaagagaatta
gctcagcagattcaatctgttgctcaagcttacagtgcacgtggttgcataaggaacact
tgtctatttggtggatcacctaaaggcccacaagccagagacttagaaagaggtgtggaa
attgtcattgccactcctggtcgccttattgactttttggaacgtggaaccacaaacctg
cgccgctgcacatatttagttttggatgaagctgacaggatgttggatatgggattcgag
cctcaaatcaggaaaattattgaacagatacgccctgacaggcaagttttgatgtggtct
gccacatggcctaaggaaatccaagccttagccgaagatttcctaactgattacattaaa
gttaacattggctctctaaacctttctgcaaataataatattaaacaaattattgaagta
tgtgaggaacatgagaaagaagcaaaactaagcaaccttctaaaagagatagcctcggag
aaagacaataaggtcattgtttttgttgaaacaaaaaagaaagttgacgatattgctcgt
gctgttcgacgtaatgggtacaaagctctagctattcatggagacaaatctcaaccagag
cgtgacgcagtgcttacggagttccgtaatggttctacgaccatattgattgctaccgac
gtagctgctcgcggtttagatgtcgaagatgtaaaattcgtcgtcaattttgactaccct
aactcctctgaagattatattcatagaatcggccgcacggggcgatgccagcagtctggt
acagcatacacttactttactagtggtgacgctcgtcaagctcgtgcattagttggagtc
ctaaaagagacgggacaaaacccacccacaaagttaaatgatatggctagaaacaacaat
aacagctctgggcgtaatcgttggcagcaacgaaaagaaaacaacagtggctctagttca
ccgcgccaaaagagtaaccagtggaataataaaatggccagtggtggtagtgatgatggt
caaaactctattcaaacccacacattcactcagcaaccaccgagattttccaaccaaact
caaaacaaccagggctatagacagaacaattatcaaaaaactgtacccttcccgagtcct
aatgtttttgattcaatgggcacatatcaaggaggttacaataatggttatcaaaatgcc
tacaataaccaaaatgggtatggtcaaaggccatacaataatacacgtaataatggccaa
caataccgcaacaataatgcaggaggcaacaaatccagtggatcaggatcttcatttgga
tcacccccacctcactatgctcctgcacattacccgcagatgcatccccaccaccaggaa
atgctaggtggcaagttctacggcggcggcgtgggtggtggtgggccttgcggttaccag
gcagcggtgggagggggcgtgccctacccgcatctgccccccggcccgttgttatacgca
gcccccgtacagcagtaa
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