Pieris napi (green-veined white): 125049060
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Entry
125049060 CDS
T08706
Name
(RefSeq) collagen alpha-1(XVIII) chain-like isoform X1
Organism
pnap
Pieris napi (green-veined white)
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Gene cluster
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
Motif
Other DBs
NCBI-GeneID:
125049060
NCBI-ProteinID:
XP_047504090
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Position
4:3646198..3799825
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AA seq
1201 aa
AA seq
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MTAMENIRLFMSTQLFSRLLFLSLLLHSTHGFGNEGLFGSKYPNDIPEYDLLHAIGVPFS
NPKTQYFDEGLDGFPAYGLKPGSDIKSPYRLFMPEKLYAEFSITATVRPANKDGGFLFSV
VNPLETVVQLGVQLIPSGPGLTNISLLYTDANIYALSQTIASFVVPSFSKKWTRFALRVT
NDNVTLFLNCLEFDTVVVKRNPQELVFDSASTLYVGQAGPLISGAFHGAFQELKLFGSPS
QAEVQCVNTFEDIGKGGEGDEIYIDNSLVDQEEGDVEGSGRYGTIPPFPPPPPGLNGYAP
ILRGEKGERGPRGLPGESIRGPPGPPGPPGLPGIPGTAIVESSGDDAMNIKQIFGENYAS
VGQCGCNSSTLMALLELAPELRGPPGPPGVTGAEGRIGPPGIPGQMGPTGERGPIGPRGE
KGDRGDEGPRGPEGITGQKGEPGVDGRPGTAGAPGPPGSPGSSDYGNFESNWKPRQIYKE
SLLGAYGGGAIGRPGAPGPKGDAGQSGPAGLQGERGFAGAKGERGLPGQSGLKGDRGYPG
PKGDRGVKGDRGGPGLDGRPGLPGANGRFGEKGEKGERGSPGPPGPPSIPVTGFTTEDSE
FLSSGRVVAGLHGEKGEKGEKGDPGKDGIPGFPGKDGKSGERGDIGPSGMPGMSGPPGAA
GLKGERGERGPPGPVSITSGGSDIITVKGEKGDLGPRGRRGRSGPPGPRGLQGPPGVPGP
PGKAGDKGENGLPGWMNNKGRPGTFGPPGNTGPKGEKGDPGVNILDVSMFKGEKGDRGDN
GFPGPKGIQGPPGPPGIAPKSDVVQYVPGPPGPPGPPGSPGLAIVGPKGEPGISYIEEGP
IHGSTKFFGRPVQKSAFDELKALTELKELKEKTKERLGRDNFESRSHHADESSKTVPGAS
VFRTTEEMMRLASSSPVGALAYVMEEQVLFLKVNTGWQYVLLGSVVSQAAPLTTTHSPVT
PPMPAASLVHRGPISNLVDSPVLAPVGPSLRLAALNEPLSGNMHGVRRADYACYRQARRS
GLKGTFRAFLTSRIQNLDSTVRYADRHLPVVNIMGEVLFKSFSNIFDGNGGFIAGTPRIY
SFSGKNIMMDSNWPQKLIWHGSHASGERALDTFCEEWQNGEPTSRGMAASLYSHKLLSQE
RYSCNNHFAVLCIEATAHESSRRKRSTFRYNSTQDDEDYLYNAEEYQELLNDIFAQPFRE
D
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgatggaaaatataaggttgttcatgtctacgcagcttttttcaagattgctg
tttctgtcgctactcctacattcaacgcacggcttcggcaatgaagggctttttggttca
aaatacccaaacgatatccccgaatacgacttgctgcacgctatcggtgttccatttagc
aatccgaagacccagtacttcgatgaaggcctcgacggttttccggcttacgggctcaag
ccgggatctgatattaaatctccgtatcgactctttatgcccgagaaactttacgctgaa
ttctctataacggctactgtacgaccggcaaataaggacggcggattcctcttttctgtc
gttaaccctttggaaactgttgttcagctcggtgtacagcttataccgtctggtcccggg
ttgacgaatatttctttgctatatacagatgcgaatatttacgcgttatctcaaacgatc
gcttcgttcgtggtaccttcgttttctaagaagtggacacggttcgcattgagagtaaca
aatgataatgtaacgttatttctaaattgcttagagtttgatacggtggttgttaagagg
aatccgcaggaattagtctttgattctgcttcgactttgtacgttggtcaggcgggtcca
ctcatctctggagctttccatggtgcctttcaagagctgaagctttttggatcgccttca
caagccgaagtacagtgtgtgaacacatttgaggatataggcaaaggcggcgaaggagac
gagatttatattgacaattcattggtggaccaagaagagggggatgttgaggggtcgggg
aggtatgggacgattccgccatttccgcccccaccacccggacttaatggttatgcccca
atcttaagaggtgaaaagggagagagaggaccaaggggtttacccggagaatcgatacgc
ggaccaccaggacctccaggaccgccagggcttcccggtattcctggaacagctattgtt
gaatcatcaggagatgatgcaatgaatataaagcaaattttcggtgagaactacgcatca
gtcgggcaatgtggctgcaacagcagcacactaatggcacttctcgagttggcaccggaa
ctccgaggtcctccaggtccaccgggggtcactggagcagaagggcgcattggaccacct
ggcatacctggtcaaatggggccaaccggtgaacgcggtccgattggtcctcggggcgaa
aagggtgatagaggggatgaaggtccccgtggtccagaaggcataacaggacaaaaggga
gagcctggcgttgatggaagacctggcactgctggagcgcctggaccacctggatcgccc
ggttcgtctgactacggtaactttgagtcaaattggaaacctaggcaaatatacaaggaa
tcacttttgggggcttacggcggaggtgcgattggcagacccggagctcctggtcctaaa
ggggatgctgggcaatcagggcccgctggacttcaaggagaacggggatttgctggagct
aagggcgaaagaggtcttccgggccaaagtggtttaaaaggcgatcgtggttatcctggc
cctaaaggtgacagaggagtaaaaggtgaccgtggaggtcctggtttggatggccgtccc
ggacttccgggggcaaacggacgctttggtgaaaagggagaaaaaggagaacgtggctca
cctgggccgccgggtccaccatcgattcctgtcacaggttttacgacggaggattcagaa
ttcctttcgtctggtcgagtcgttgccggattgcatggagagaaaggcgaaaagggtgaa
aagggtgaccctggaaaagatggcataccaggttttccaggcaaggatggaaaatcagga
gaacgtggagatattggcccttcaggaatgcccggtatgtctggacccccgggtgctgca
ggtttaaaaggagaaaggggagagagaggcccacccggaccagtatcaataacttcaggt
ggttctgacataataacagtcaagggcgaaaagggggatctaggacccagaggtagaaga
ggtcgatctggaccaccaggacctagaggacttcagggcccaccaggcgtgcctggacct
ccgggaaaagccggagataaaggtgaaaacggacttcctggatggatgaataataaggga
cgaccgggtacatttggtcctccggggaacaccggacctaaaggggaaaaaggagaccca
ggcgtgaatattttggatgtctcaatgttcaaaggtgaaaagggagatcgtggtgacaat
ggatttccaggacccaagggaattcagggtccaccgggcccaccaggcattgctccaaag
tcggatgttgtccagtacgtgccgggtccaccaggtccccctggacctcccggatcaccg
ggtctagctatagtgggtcctaaaggagaacccggaatcagctatatagaagaaggtcct
attcatggcagtacgaagttcttcggcagaccagttcaaaaaagtgcttttgacgaattg
aaagctctaacggagttaaaagaactaaaagaaaagactaaagaacgtcttggtcgagat
aatttcgagtcaagaagtcaccatgcagatgaatcaagcaaaacggtaccaggtgcgtcc
gtatttcggaccactgaagagatgatgcggcttgcctcttcgagccccgttggtgcattg
gcctatgttatggaagaacaagttctgttcctcaaagtgaatacaggatggcaatatgtt
ttgctcgggtcagtagtgtcccaagcagcaccgttgacaacgacgcactcccccgtcaca
cccccaatgcccgcagccagtcttgttcacaggggaccaatatccaatttagttgactcg
ccagtactcgctcctgtcgggccaagtctccgtttagccgcactaaatgaacctctatca
ggtaacatgcatggcgtacggcgcgctgattacgcgtgttatcgccaagccaggcgctct
ggtttaaagggaactttcagagcttttcttacgagcaggatacaaaatctagactccaca
gtacgttacgctgacagacatttaccagtggtcaatataatgggagaggtcctctttaaa
tcattttctaatatttttgatggaaatggaggcttcattgctggtactccacgaatatac
agctttagcgggaagaatattatgatggattcaaattggccacaaaaactaatatggcac
ggctcccacgcaagtggtgaacgcgcgttggacacgttctgcgaagaatggcagaatgga
gagcccacatccaggggcatggctgcgtcattatattcacacaaactgctctctcaggaa
aggtattcgtgcaataatcacttcgcagtattatgtatagaagccacagctcacgaaagc
tctagaagaaaaagaagtactttcaggtacaattcaacgcaagacgacgaggactacttg
tacaacgctgaggaatatcaagagctacttaatgatatatttgctcaaccatttagagaa
gattaa
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