KEGG   Pieris napi (green-veined white): 125049089
Entry
125049089         CDS       T08706                                 
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
pnap  Pieris napi (green-veined white)
Pathway
pnap03030  DNA replication
pnap03410  Base excision repair
pnap03420  Nucleotide excision repair
pnap03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pnap00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    125049089
   03410 Base excision repair
    125049089
   03420 Nucleotide excision repair
    125049089
   03430 Mismatch repair
    125049089
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pnap03032]
    125049089
   03036 Chromosome and associated proteins [BR:pnap03036]
    125049089
   03400 DNA repair and recombination proteins [BR:pnap03400]
    125049089
DNA replication proteins [BR:pnap03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    125049089
  DNA Replication Termination Factors
   ELG1-RFC complex
    125049089
Chromosome and associated proteins [BR:pnap03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    125049089
DNA repair and recombination proteins [BR:pnap03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     125049089
  Check point factors
   HRAD17(Rad24)-RFC complex
    125049089
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 RCF1-5-like_lid AAA_assoc_2 AAA_14 AAA_22 RuvB_N AAA_11 DUF815 AAA_16 AAA_5 AAA_7 PhoH AAA_30 DEAD ResIII Gp44_lid AAA_19 Mg_chelatase LisH_TPL AAA_24 Sigma54_activ_2 bpMoxR DUF7632 TIP49
Other DBs
NCBI-GeneID: 125049089
NCBI-ProteinID: XP_047504140
LinkDB
Position
4:9475403..9481574
AA seq 333 aa
MTVGQTAINLPWVEKYRPSKLDDLVSHDDIVKTINQFMKENQLPHLLFYGPPGTGKTSTI
LACAKQMYTPQQFNSMVLELNASDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAM
TNDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLQQNQIVPRLQEIV
EKEGVKISDDGIKALLTLSGGDMRKVLNTLQSTWLAYRDVTEDNVYTCVGHPLRSDINSI
LNWLLNENDFATSFQNIQDLKIAKGLALGDILTEIHTIITRLKLPPEVFISLLIKMADSE
ARLASGCSERIELAALIAAFQQAREQVNIDDLL
NT seq 1002 nt   +upstreamnt  +downstreamnt
atgactgtgggacagacggcaataaatttaccatgggtagaaaagtatcgaccatcaaaa
ctagacgatttggtttcgcacgatgatattgtaaaaactattaaccagtttatgaaggaa
aaccaactacctcatttattgttctatggccctccaggcacaggaaagacgtctacaata
ctagcttgtgctaaacagatgtacacaccccaacaattcaattcaatggttttagaatta
aatgcttctgatgatcgaggtattggaatagtaagagggcaaatattaagctttgcttca
acaagaacaatctttaaagcaggacccaaacttataattcttgacgaagctgatgctatg
actaatgatgctcaaaatgctttgcgaagaattatcgagaagtacacggaaaatgtgaga
ttttgcataatttgcaactacttgggtaaaataataccagcgctacagtcgcgatgcaca
cgttttcgtttcgcaccacttcagcagaatcagatagtccctcgattacaggaaattgtt
gaaaaagagggggtaaaaatttcagacgacggcattaaggcgttattgacactctcaggt
ggggatatgcgaaaagtactaaacacattacaaagcacttggctagcgtatcgtgacgtc
acggaggataatgtgtacacttgtgttggtcatcctctccgttcggacataaatagcata
ctcaattggctacttaatgagaatgatttcgctacctcatttcaaaatatccaggatttg
aaaatagcgaaaggtttagcgctaggcgatatattgacggagatacacaccataattaca
agattaaaactacccccagaggtgttcatatctttgttaataaagatggcggactccgaa
gcgcgtcttgcaagcgggtgtagtgagcgaatagaactggcagcccttattgctgctttt
cagcaggccagagaacaagtcaatatagacgacttactctaa

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