Pieris napi (green-veined white): 125049470
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Entry
125049470 CDS
T08706
Name
(RefSeq) pre-mRNA-processing factor 19
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
pnap
Pieris napi (green-veined white)
Pathway
pnap03040
Spliceosome
pnap04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pnap00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125049470
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125049470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pnap03041
]
125049470
04121 Ubiquitin system [BR:
pnap04121
]
125049470
03400 DNA repair and recombination proteins [BR:
pnap03400
]
125049470
Enzymes [BR:
pnap01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125049470
Spliceosome [BR:
pnap03041
]
Complex B
Other components
Prp19 complex
125049470
Complex C
Prp19-CDC5 complex
125049470
Ubiquitin system [BR:
pnap04121
]
Ubiquitin ligases (E3)
U-box type E3
125049470
DNA repair and recombination proteins [BR:
pnap03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
125049470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_WDHD1_1st
Prp19
Beta-prop_WDR36-Utp21_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WDR55
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_Aladin
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_Vps41
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_HPS5
NBCH_WD40
Tricorn_2nd
Beta-prop_RIG_2nd
Beta-prop_Nup120_160
Beta-prop_WDR41
Beta-prop_SPT8
U-box
Beta-prop_IFT122_1st
eIF2A
Beta-prop_DCAF4
Beta-prop_DCAF12
Beta-prop_ACSF4
RMC1_N
Beta-prop_VPS8
WD40_like
PROPPIN
Cytochrom_D1
PAS_11
Motif
Other DBs
NCBI-GeneID:
125049470
NCBI-ProteinID:
XP_047504742
LinkDB
All DBs
Position
5:13258140..13263517
Genome browser
AA seq
499 aa
AA seq
DB search
MALYCAISNEVPEVPVVSPSSGAVFERRIIEKYIIENGVDPISGKELSVEDLIEIKTPPI
VKPKPPSATSIPATLKSMQDEWDALMLHTFTQRQQLQTARQELSHALYQHDAACRVIARL
TKEVTAAREALATLKPQAGIVAPQPTHAAEAAAGPGGAVAIGMSAEVVSRLQERATALTQ
ERKRRGRTVPEGLVTPEQIRSFLTLASHPGLHSASVPGILALDINPSDHSRILTGGNDRN
ATVFNKDTEQVVAILKGHTKKVTKVIYHPDEDTVITASPDHTIRVWNVPTSQTTVLLRSH
EGPVTGLSLHPTGDYVLSTSTDQHWAFSDIRTGALLTKVSDSSGVSLTTAQFHPDGLIFG
TGTENSQVKIWDLKEQSNVANFPGHVGPVTSISFSENGYYLATAAEDSCVKLWDLRKLKN
FKTIQLEEGYAIKELCFDGSGTYLGVAGTDVRVYLCRQWQELKVFNEHTASATGLRFGHH
AHYLASTSMDRTLKIYGIE
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggctctttattgtgcaatctcaaatgaagtacccgaagttcctgttgtgtctccgtca
tcgggcgcggtttttgagaggcgtatcatagaaaagtatataattgaaaatggtgtagat
ccaattagtggcaaagaattaagtgtagaagacctaattgaaatcaaaactccacctata
gtgaaaccaaaacctccaagtgctacatctatccctgcaacacttaaaagcatgcaggat
gaatgggatgccctgatgctacacacatttacccagaggcagcaacttcagacagctaga
caggaacttagccatgccttatatcaacatgatgctgcttgccgggtaatcgctaggttg
actaaagaagtaacagctgcaagggaggctctagctacactcaagccccaagctggtatt
gttgcaccgcagcccacccatgccgctgaagcggcggctgggcccgggggggcagtggcc
atcggtatgtctgcggaagtggtttctcggctgcaggagcgagccacggccctcacgcaa
gaaaggaagagacgtggtcggaccgttccagagggactcgtcacgcccgaacagattcga
tcattcctcactcttgcatcacatcctggtctgcactccgccagtgtgcctggtattttg
gccttggacatcaacccttcagaccacagccgcatattgactggtggaaatgaccgcaat
gctacagtctttaataaagatacggagcaggttgtggctatactgaagggtcacacgaag
aaggtgactaaggtgatctaccatccggatgaagacacggtcatcaccgcatcaccagat
cacactatccgcgtctggaatgtacctacatcgcagaccacagtactcctccggtcccac
gagggcccggtgaccgggctgtcgctacatcccaccggagactacgtcctgtccacgtcc
accgatcagcactgggctttctcggacatccgcaccggtgctctgctcactaaggtgagc
gactcgtccggcgtaagcctcaccacggctcagttccatcccgacgggctgatcttcgga
accgggacggaaaactctcaggtgaagatctgggacttaaaagagcagagcaacgtagcg
aacttccccggtcacgtgggacccgtcacatcgatatccttctccgagaacgggtactac
ctggccacggccgccgaggattcctgcgtcaagctctgggatctgaggaaacttaagaac
ttcaagactattcagttggaagagggatacgccattaaggagttgtgcttcgacggcagc
ggcacgtatctgggcgtggccgggaccgacgtccgcgtctacttgtgtcgtcagtggcag
gagctcaaggtattcaacgagcacactgcgtcggcgacgggcctgcggttcggtcaccac
gcccactatttggcctccactagcatggaccgcaccctcaagatttacggcatagagtga
DBGET
integrated database retrieval system