Pieris napi (green-veined white): 125049856
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Entry
125049856 CDS
T08706
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
pnap
Pieris napi (green-veined white)
Pathway
pnap03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pnap00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125049856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pnap03041
]
125049856
Enzymes [BR:
pnap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
125049856
Spliceosome [BR:
pnap03041
]
Complex C
Other components
Step II factors
125049856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
S1
HA2_N
DEAD
GIPC1_GH2
AAA_22
AAA_19
Flavi_DEAD
nSTAND3
AAA_30
PhoH
TsaE
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
125049856
NCBI-ProteinID:
XP_047505296
LinkDB
All DBs
Position
5:complement(12300493..12311082)
Genome browser
AA seq
1283 aa
AA seq
DB search
MDELAKLEHLSLVSKVCTELDNHLGINDKDLAEFIIDIADKNTNFDDFKKSLIENGAEFS
DSFMTNLLRIIQHMKPAAIQSENKDTTKPSNPLAEKFPGLAIANEKPHFSSDDDSDINEK
SNKRITTKDIFKVECKTQVGKDEIVDQAMAELEALAPSNIKNSEIKISSCKDYKDDKIDI
PKLKEGRSRSRDRSKGRRSRSRGRRSRSRGRRSRSRGRRSRSRDKTSRSGDKTLSKDRDR
RRRSRSRHRDRSRSHHRDRSRSHHRVRSRSRHRDRSRDRYRRSRSRGKRSQSKEKERDFK
RDRDGNHGKRFRKKSPEAESVSDDPEPGKIYSGRVANIVPFGCFVQMEGLRKRWEGLVHI
SQLRAEGRVTNVSDIVSRGDKVKIKVLSVTGQKVSLTMKDVCQDTGKDLNPTSHAHLEAE
RAGRNPDRPAPAATVLAGLQGGLDPEEDSSRKRVTRISSPERWEIKQMISSGVIDKSELP
DFDEETGLLPKDEDGEADIEIELVEDEPPFLQGHGRALHDLSPVRIVKNPDGSLAQAAMM
QSALAKERREQKMLQREQEMESVPTGLNKNWIDPLPETDGWALAANMRGTGITTQDLPEW
KKHVIGGKKSSFGKKTNLSLLEQRQSLPIYKLRDELIKAISDNQILIVIGETGSGKTTQI
TQYVAECGLTARGRVACTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSPETVI
KYMTDGMLLRECLMDLDLKTYSVIMLDEAHERTIHTDVLFGLLKQAVQKRPELKLIVTSA
TLDAVKFSQYFFAAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDILL
FLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAPPGSRKVVIA
TNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGMDSLVVTPISQAAAKQRAGRAGRTGPGK
CYRLYTERAYRDEMLPTPVPEIQRTNLATTVLQLKTMGINDLLHFDFMDAPPVESLIMAL
EQLHSLSALDSEGLLTRLGRRMAEFPLEPNLSKILIMSVALQCSDEILTIVSMLSVQNVF
YRPKDKQALADQKKAKFNQAEGDHLTLLAVYNSWKNNKFSNAWCYENFVQIRTLKRAQDV
RKQLLGIMDRHKLDVVSAGKNTVRVQKTICSGFFRNAAKKDPQEGYRTLVDSQVVYIHPS
SALFNRQPEWVIYHELVQTTKEYMREVTTIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRL
EPLYNKYEEPNAWRISRVRRRRN
NT seq
3852 nt
NT seq
+upstream
nt +downstream
nt
atggatgaacttgccaagttagaacatttgtctctcgtctccaaagtttgtacagagctg
gacaatcatttgggtattaatgataaagatttagctgaatttattattgatatagcggat
aagaacactaactttgatgattttaaaaaatcattaatagaaaatggagcagagttttca
gattcttttatgacgaacttgttgcgaattattcagcatatgaaaccagcagctatacaa
agcgaaaataaagacactactaagccttccaacccgttagctgagaaatttccaggacta
gctattgctaatgaaaaaccacatttctcttctgatgatgatagtgatattaatgaaaag
tcaaacaaaagaattacaacaaaggacatatttaaagttgaatgtaagacccaagtgggt
aaagatgaaatagttgaccaagctatggctgaattggaagccttagcaccctctaacatt
aagaatagtgaaataaaaatctcatcatgtaaagattataaggatgataaaattgacata
cctaaattaaaagaaggacgaagtagaagtagagatagaagtaaagggcgaagaagtaga
agtagaggtcggagaagtaggagtagaggtcggagaagtaggagtagaggtcggagaagt
agaagtagagataagacaagcagaagtggagataagacacttagtaaggatagagatagg
agaagaagatcaagaagccgtcatcgagacagatccagaagccatcatcgggacaggtca
agaagccaccatcgagtcagatcaagaagccgtcatcgagacagatccagagataggtat
aggcggtctcgatcaagaggaaaaagatctcagtcaaaagaaaaagaaagggattttaaa
agagacagagatggcaaccatggcaaaaggtttagaaagaagagtccagaagcggaaagc
gttagtgatgatcctgagcctggtaagatttatagtggtcgagtagcaaacatagttccc
tttggttgctttgtgcaaatggagggtttaaggaagcgatgggaaggtctggtgcatata
tcacagttgagggctgaggggagagtgacaaatgtgtctgatattgtttcaagaggagac
aaagtcaagattaaagtattatcagtaactggacaaaaggtgtcactaacaatgaaggat
gtctgtcaagatactggaaaagatttgaatccaacgtcacatgctcacttggaggcggag
cgagctggtcgtaacccagatagacctgcacctgcagcaacagtgctggcagggctccaa
ggtgggctcgaccctgaagaagactccagcaggaaacgggtcaccaggatctccagtccc
gagagatgggagatcaagcagatgatatcgtcgggtgtaatagacaagagtgagctacct
gattttgacgaagagaccggtcttctcccaaaagatgaagatggagaagctgatattgaa
attgagcttgttgaagatgaaccaccgtttcttcaaggccatggaagggcattacatgat
ttgtctcctgtgagaatagtgaagaaccccgatggatctttggcacaagctgccatgatg
cagtcagctctagctaaagagagaagagaacaaaagatgttgcaaagggagcaagaaatg
gagagtgtaccaactggtctgaacaagaactggatagatccacttccagagacagatggt
tgggctctcgcagcaaacatgagaggaacgggcattaccactcaggaccttcccgaatgg
aagaaacatgtgatcggagggaagaaatcttcatttggaaagaagacgaatctgtcactt
ttggaacagaggcagtcgttgcccatttataagctcagggatgagttaataaaagctata
tcagataatcagatcctcatagttatcggggagactggatcaggtaaaacgacccaaata
acccagtacgtggctgagtgtgggttaaccgcccgtgggcgggtggcctgtacccaaccc
agacgtgtggccgccatgtctgtggccaagagagtcgctgaggagttcgggtgccgactt
ggacaggaagtgggttacactatccgtttcgaagattgtacgtcgccggaaactgttatt
aaatacatgacggacggtatgttactccgggaatgtctcatggatttggatctcaaaacc
tactccgttatcatgttggacgaagctcacgagcgcacgattcatacggacgtccttttc
ggtcttttgaagcaagctgtccaaaagagaccagaactgaaactcattgtcacttcggcc
acgttggatgctgtcaagttttcccaatatttcttcgctgcccctatcttcacaattcct
ggaagaacgtttcccgtagaagttctgtatacgaaagaaccggagacggattacctagat
gcctctctaatcacagtgatgcagatacatttgagggaacctccaggagatatccttctc
ttcttaacgggtcaagaagagatcgacacggcctgcgagatcctctacgaaaggatgaag
tctttgggaccggatgtgcccgaattgataattttgccagtttattctgctctaccctcg
gaaatgcagaccaggatctttgagccagcaccgccggggtccaggaaagtggtgatagcg
acgaacattgctgaaacctcgctgaccatcgatgggatatattatgtagtggatccaggg
tttgtgaagcagaaggtttataattcgaagaccggtatggactcgcttgtcgtgactccg
atttcacaggcagcagcgaaacaaagagccggtcgcgctggaagaacaggtcccggcaaa
tgttaccggctctacactgagagagcttacagagatgagatgctgccgacgcccgtgccg
gagatacagaggacgaatcttgcaaccactgtgctacaattgaaaacaatgggaataaac
gatctcctacatttcgacttcatggacgcccccccagttgagtctctcattatggccttg
gaacaattgcattcgctctctgcacttgactcggaaggacttttgacgagattgggaaga
cggatggctgaattccctcttgagccaaatttatcaaagatcttgattatgtcagtagca
ctgcaatgctccgatgaaattcttacaattgtctctatgttgagcgttcaaaatgtcttc
tatcggcccaaagacaaacaagctctcgctgaccagaaaaaagctaaatttaaccaagcc
gagggagatcacttaaccctgttagcggtgtacaatagttggaaaaataataaattctcg
aatgcatggtgttatgagaattttgtccaaatcaggactttgaagcgagcacaagatgta
aggaaacagctcttgggaatcatggacagacacaagttagatgtggtatcggctggaaag
aacacagtgcgtgtgcagaagacaatatgttctggcttcttccggaatgccgctaaaaag
gacccgcaggaaggctacaggaccctggtggatagtcaggtggtctacattcatccgtct
agtgccctatttaataggcagcctgagtgggttatctaccatgaattagtgcagacaacc
aaggagtacatgcgggaagtgaccacgattgaccccaaatggctggtggagtttgctcca
gcattctttaaattctcagacccgacaaagctgtctaaatttaagaaaaaccagagactg
gagccgttgtacaataagtacgaagaaccgaacgcttggagaatatccagggtgcggagg
cgaagaaattaa
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