Pieris napi (green-veined white): 125050121
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Entry
125050121 CDS
T08706
Name
(RefSeq) Bloom syndrome protein homolog
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
pnap
Pieris napi (green-veined white)
Pathway
pnap03440
Homologous recombination
pnap03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pnap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
125050121
03460 Fanconi anemia pathway
125050121
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pnap03032
]
125050121
03400 DNA repair and recombination proteins [BR:
pnap03400
]
125050121
Enzymes [BR:
pnap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
125050121
DNA replication proteins [BR:
pnap03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
125050121
DNA repair and recombination proteins [BR:
pnap03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
125050121
Bloom's syndrome complex (BTR)
125050121
FA (Fanconi anemia) pathway
125050121
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
RecQ_Zn_bind
HRDC
ResIII
Motif
Other DBs
NCBI-GeneID:
125050121
NCBI-ProteinID:
XP_047505690
LinkDB
All DBs
Position
6:complement(781300..797820)
Genome browser
AA seq
1341 aa
AA seq
DB search
MSCKKPIGAGKQNSLFNYIKKEDCGTIQQTNKEPDKKSKFVWKSKSSTSSFNPPYKTDFH
QKEDSINIKPDISNITSLRSSVNTSTNITKYNSQINDLSDAMDVDDNPFNVSDKHMSPSP
SSIKSMRISETGYSAKIEDTEKSSVKVKIAEKDKNLRTPKKISPKKDKDPLRNLKLDSSI
SGFLLNISEHPAINKKHNDKKLITHTDVEECKKMYIELLEKISDAFNRIPNCIKEKFPGY
DSKTYSKINYLKTKLKFAIQQKPRDCLQSSSETLNSSNEVNGRESPSLLNNDDDLEDFDL
SSQVAHKVIDKGLINNIETSTPDIPTFNKNQPNKTIYSDLVPKKALSFDVFSPSNGSIKS
INSSINSDSESLNSSDNQTKKGKFVFKRPSRAADDLNTPTRDVPSSTFERLKIASEKLHP
LVTEVAPKCAPVGNSSVAFQPPQNLGKPCTVVSPIVKDSPSETDFEDADDYEVPIDMDDL
TDIIPEDSRTSVINISDSLPSTSKVQINDKEFAIDDDGWPEYNPEDFGEVMEEKASDVSK
DVINLMDQSVTAPKYEGMGDFHAGTKNDGITGEFDGSNFPHSGLMMEMFKEKFGLKSFRP
NQLQVINATLLGHDCFVLMPTGGGKSLCYQLPAILTPGVTIVISPLKSLILDQVNKLLSL
DIPAAHLSGDISLATVEEVYHKLSLREPAIKLLYVTPEKVSGSPKFQSMLDMLYSRGKIA
RFVIDEAHCVSQWGHDFRPDYKRLFMLRERFPETTLMALTATATPRVRMDILHQLKVTNC
KWFLSSFNRPNLAYRILEKKPKNINQDVAKIIKEKFFRASGIVYCLSRKECENLSGDLRK
VGIQAAAYHAGLTDKKREAVQAGWVADKFTVICATIAFGMGVDKSDVRYVIHHSMPKSVE
GYYQEAGRAGRDGEPATCLLYYCYGDVVRYRRLLDLERNATPEAKRVHIENLLRMVEVCE
SVSECRRAQVLTYLGEKFSRELCKRDKKTACDNCLNDHNYKPVDVTEECKVIARAIRDAG
RSSFTLLHIADALRGSMQQRISGLRESPLHARCKSWPRGDAQRLLRQMVVRGLLAEKLVV
NKDIASAYVTLGPNIQKLMSGNLRVVFPMKVEKKATLVTTEVATDRKETPIIALIKRIEE
RCYADLVEACREMAAARGSSLTAVLPLAALKAMSIRLPESAPDMLTLPHITRANFEKYGQ
DLLQITSAYAIEKIGLLMQYQDELEDEKKQEDKDFQNDSGSDTDWGSLAREASTSSSRGR
GRGTYRGGVRKKYRRKKTPSSAKKKAYRGTFARRGRGSTGTKRSPAKSGSSSGSKLGSMP
VPRTTVANTRPGVALSSKFNF
NT seq
4026 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgcaaaaagccaatcggtgctggtaaacaaaattccttatttaattatattaaa
aaagaagattgcggtactattcaacaaacaaataaagaacctgataaaaaatcaaaattt
gtttggaagtcgaaatcctcaacttcaagcttcaatccaccttacaagacggactttcat
caaaaggaggactcaattaatattaaaccagatatatcaaatattacatctctgcgcagt
tctgtaaatacgtcaacaaatattacaaaatataattcacaaataaatgatctatctgat
gctatggatgtggatgataatccattcaatgttagtgacaaacatatgagtccttcaccc
agttccattaaatctatgagaataagtgaaactggatactcagcaaaaatagaagataca
gaaaagtcttcagtaaaagtaaaaatagcagaaaaggacaaaaatctcagaacaccaaaa
aaaatcagccctaaaaaggacaaagatccattaagaaatttaaagttagacagttctata
tcaggtttccttttaaatatatctgaacatcccgctataaataaaaagcataatgataag
aaacttatcacacataccgacgttgaagagtgtaaaaaaatgtatatagaactattagaa
aaaataagtgatgcatttaacagaataccaaattgtataaaagaaaagtttccaggatat
gacagtaagacctattcaaaaataaattatttaaaaacaaaattaaagtttgccatacaa
cagaaaccaagagactgcttacaatcttcttctgaaacacttaattcaagtaatgaagtg
aatggtagagaaagtccgtcattactaaataatgatgatgaccttgaagactttgatctg
tctagtcaagtagcacataaagtaattgataaaggcctaattaacaatatagaaacttca
acaccagatatacctacatttaataaaaatcaacctaataaaacaatatactcagattta
gtacctaaaaaagcactctctttcgatgtgttttcgcccagcaatggatctatcaaaagc
ataaattctagtataaactcagattcagaatctttaaactcatcagataatcaaactaag
aagggaaaatttgtttttaaaagaccttcacgagcagctgatgatttaaatacgccaaca
agggatgtaccttctagtacatttgaaagattgaagattgcatctgaaaaactgcatcca
ttggtaaccgaagtggcgcccaaatgtgcacccgtaggcaacagttcagtagcatttcaa
cctccgcagaatttaggcaaaccttgcactgtcgtttcaccaattgttaaagatagtccg
agtgaaactgattttgaggatgcagacgattacgaagtgccaatagatatggacgacctc
accgatattattccagaagattcgagaaccagtgttattaatattagtgattcactaccg
agtacgagtaaagttcaaattaatgataaagaatttgccatcgatgatgacgggtggcca
gaatataaccccgaggattttggagaagtgatggaggaaaaagccagtgatgttagtaaa
gacgtgatcaacttaatggatcaatcggtgactgcaccaaaatatgagggaatgggtgat
tttcatgcgggtaccaaaaatgacggaataactggagaattcgacggatcaaacttccca
cattcaggcctaatgatggaaatgttcaaagaaaaatttgggttaaagtcgtttcggccg
aatcagcttcaagttatcaacgctacattgctaggccacgattgcttcgtgctaatgcct
actggaggaggtaaatctctatgctaccagctacctgcgatattaacaccaggtgtcaca
atagttatatccccattaaaatcgctcatcttggatcaagtcaacaaactattgtcctta
gacataccagctgctcatctatccggcgatatatctctagctactgttgaggaggtgtat
cacaaattgtctcttcgcgagcccgctatcaagcttttgtatgtgactccagagaaagtg
agcggctcaccgaagttccagagcatgctggacatgctctattcgagagggaaaattgct
agatttgtgatagacgaggcgcattgcgtgtcccaatggggtcacgattttcgcccagat
tacaaacgattgtttatgttacgagaacggtttccggagactaccctcatggcgttaaca
gctacggccacgccccgtgtacggatggacatattgcatcaacttaaggtcacgaattgc
aaatggtttttgagcagcttcaatcgtccgaacctcgcgtatagaatattggagaagaag
ccaaagaatatcaaccaagatgtcgctaaaatcatcaaggagaagttcttcagagcgtct
ggaatagtgtactgcctctctcgtaaggaatgtgagaatctgtcaggggatttgcgcaaa
gtgggcattcaggccgcggcctatcacgccggactcaccgataagaagagggaggcggtc
caggctggatgggtcgctgataaatttactgtgatctgcgccacaatagccttcggcatg
ggcgtggacaagtcggacgtccgctacgtgatccaccacagtatgccgaagtccgtggaa
gggtactaccaagaggcggggagggcgggccgagacggcgaaccagccacttgtctgctg
tactactgctacggggacgtcgttaggtatcgccgcttgctggacctggaaagaaacgcg
acacccgaagcgaagcgtgtccacatagaaaatctcctccgaatggtggaagtgtgcgaa
agcgtctccgaatgtcgaagggcccaagtgctgacttatctcggagagaagttctcccga
gagttgtgcaagagagacaagaagaccgcgtgcgataactgccttaatgaccacaactat
aagccggtggacgtgaccgaagagtgcaaggtgatagcgcgggccatccgcgacgcggga
cgttccagcttcacccttctgcacatcgccgacgccttacgaggctctatgcaacagcgg
atatccggtttgagagagagtcctttacatgcaagatgcaagagctggcctcgtggtgat
gcacagcgtctcctgcgtcagatggtggtccgagggctgctggccgagaagctggtcgtg
aataaggacatcgccagcgcatatgtgacgttggggcctaacatacaaaagctgatgtct
ggcaacctccgagtggtattcccgatgaaggtggagaagaaggcaaccctggtgacgaca
gaagtggccacagatagaaaggagacccccatcattgctctcatcaagaggatcgaggag
cgatgctacgctgacctcgtcgaggcttgcagggaaatggcagccgctcgtggctcatcc
ctaaccgcagtgctgcctctggccgctctcaaggccatgtccatacgactgcctgaaagt
gcgccagatatgctgacgctacctcacatcacgcgggccaacttcgagaagtacgggcag
gaccttctccagataacgtctgcttatgccatcgagaagataggtctcttaatgcagtac
caagacgaattagaagacgagaagaagcaagaggacaaagattttcagaacgattcggga
tccgacacggactggggaagtctggcccgtgaagccagcactagctcctcccggggcagg
ggaagggggacttatagggggggagttaggaagaagtacagacgtaagaagactccgtcg
tctgccaagaagaaggcctatcgagggaccttcgcccgcagaggccgaggctccactggc
accaagcgctctcccgctaagtctggatcttcaagcggtagcaagctgggcagtatgcca
gtacctcggaccacggtggcgaacacacgacctggagtcgccctttctagtaaatttaac
ttctaa
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