Pieris napi (green-veined white): 125050937
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Entry
125050937 CDS
T08706
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
pnap
Pieris napi (green-veined white)
Pathway
pnap03030
DNA replication
pnap03410
Base excision repair
pnap03420
Nucleotide excision repair
pnap03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pnap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
125050937
03410 Base excision repair
125050937
03420 Nucleotide excision repair
125050937
03430 Mismatch repair
125050937
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pnap03032
]
125050937
03400 DNA repair and recombination proteins [BR:
pnap03400
]
125050937
DNA replication proteins [BR:
pnap03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
125050937
DNA repair and recombination proteins [BR:
pnap03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
125050937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
PTCB-BRCT
AAA_22
AAA_30
AAA_5
AAA_14
AAA_16
NTPase_1
BRCT_2
RNA_helicase
AAA_18
RCF1-5-like_lid
RuvB_N
AAA_19
AAA_7
AAA_33
C4_MG1
AAA_6
Motif
Other DBs
NCBI-GeneID:
125050937
NCBI-ProteinID:
XP_047506981
LinkDB
All DBs
Position
7:5124243..5133448
Genome browser
AA seq
1095 aa
AA seq
DB search
MSKSIRSYFTVIKKQTTKIADDDSDIIPESPEIQVKKKKQTKKRRIEDSDEEIFSPKKKK
VDTEQKSAHKSPKLKEVTITDLFGSGKIKKTESLVVKNKSEKQTEIGIHSDEEFEQSLLE
LDTIDNISPGKVKSHKDNQEKDIARDEPKSNKDVPKVKISPPQLSLTEDKREVKPKKHHE
TETKLKEKNDKRTDNDQNKNSKKQNKNDKIIEIADDDEHEEKVIGHKINNSSVAEKPHAI
NKSKIRKRDLSSFLEEDDDHDTSFKKKKHDDSLNESALSDQERHERKRLSASLYQKYLNR
TGPKNLGAKEIPEGAPDCLKDCAFLLTGVLDSFEREEIIDAITKYGGSVKSGVSKKVTHV
LAGEDSGPAKTAKAESLGIKIINEDQFLNMITELSKKNKNKKSNTNDKPKIKMEKSDKNK
SPKDEKSKRNHDKMSKDKSKESLNAKVKKDRSVSPTALNNDKSVSLKNPIKKERSVSPKA
NITLKNDKSVSLKNPIKKERSVSPKPKIKKEILDSYGKLKTKKSEEEVEQIDNVEKSSKD
ASLMWVDKYKPQSIKQIIGQHGEASNVKKLINWLTKWYVNRKAKLPKPNPWAKNDDGGYY
KAALLSGPPGVGKTTTVGLVCKELGFDTVEFNASDTRSKNLIKEQISELISSTSLSGYAK
GVTGKQAVTKKHVLVMDEVDGMAGNEDRGGLQELISLIKSSSVPVICMCNDRNSEKMRSL
VNYCYDLRFSRPRVDQIKAAMMTICFKEGVKVPGDVLSQLISAAGQDIRQTLHLLSVWTA
DPTLTEHDKLQKEVQRVKKDIKMGPWDAIRKVFSAEEHKTMSIIDRSDLFFTDYSLAPLF
VHENYPQVVPHCPKHEVLDRMSKAVDSISLGDLVDSRIRSNQAWSLLPLQAMYSSVIPGQ
QLSGHIGGQIQFPSWLGKNSRANKMSRLAQTIHAHTRLSTSGSKSSIFLDYSSHLRDAIL
NPLIKDKNEGISKSLQVLEEYHLLRDDLESLTELSLWPGQRNPSILIDAKVKAAMTRTYN
KQASALPYAPGAIKKAKHLDTDENGLEMDAEDDVENDSDPENDLLIKKKKMKDLEKASNS
KEKPQSSKGKGKKTK
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagagcattcggtcatattttactgtaataaaaaaacaaacaacaaaaatcgca
gatgatgatagtgatataataccagaatctcctgagattcaggtaaagaagaaaaaacaa
acaaagaaaaggcggatagaagattcagatgaagaaatattttctccaaaaaaaaaaaag
gtagacacagaacagaaatcagcacataagagtccaaaacttaaagaagttacaataact
gacttatttggtagtggaaagataaaaaaaactgagtctttagttgttaaaaataaaagt
gaaaaacaaactgaaattggtatacattctgatgaagaatttgagcaaagtctattggaa
ttagataccattgacaatatatcaccagggaaagttaaatctcataaagataaccaggaa
aaagatatagctcgggatgaaccaaaaagcaataaagatgtgccaaaagttaaaattagc
ccaccacaacttagtttaactgaagataagagagaagtgaagcccaaaaagcatcacgaa
actgaaactaaattgaaagaaaaaaatgataaaagaacagacaatgatcagaataagaat
tcaaaaaagcaaaacaagaatgataaaataatagaaattgcagatgatgatgaacatgaa
gaaaaagtaattggccataaaattaataatagttctgttgcagaaaaacctcatgctata
aataaatcaaagataagaaagagagatttgagtagttttttagaagaagatgatgatcat
gatacaagctttaaaaagaaaaaacatgatgacagccttaatgagtctgcacttagtgat
caagaaagacatgagagaaaaagactatcagcgtcactatatcaaaaatatctaaataga
acagggcccaaaaacttgggtgcaaaggaaattccggaaggagcaccagattgtttgaag
gattgtgcatttttactgactggagttttagattcctttgagcgagaagaaatcatagac
gctatcacaaaatatggtggttcagtcaaatctggtgttagtaagaaggtaacgcatgtt
ctagctggtgaagactcgggcccagcaaaaactgctaaagcagaatcattaggcatcaaa
attattaatgaagaccaattcctcaatatgattactgagttatcaaagaaaaacaaaaat
aaaaaatcaaacactaatgataaaccgaagataaaaatggaaaaaagtgataagaataaa
tccccaaaagatgaaaaatctaaaagaaatcatgataagatgtctaaagataaatcaaag
gaatctttgaatgctaaagttaaaaaggacagatcggtatctccaacagctttaaataat
gacaaatcagtgtccctgaaaaaccctattaaaaaagagagatctgtctccccaaaagca
aatataactttaaagaatgacaaatcagtgtccctgaagaaccctattaaaaaagagaga
tctgtctccccaaaaccaaaaattaagaaagaaatattggactcttatggaaaactaaaa
acgaagaaaagtgaagaagaagtagagcagattgacaatgttgagaaatcctcaaaagat
gcatctctaatgtgggttgacaaatacaagccgcagagtataaagcagattattggacaa
catggtgaagcaagtaatgttaaaaaattaatcaactggttaaccaaatggtatgtgaat
agaaaagctaagttgcctaaaccaaatccatgggccaagaatgatgacggtggatattat
aaagcagctcttttatcaggacctccgggcgttggtaaaacaacaacggtgggactagtg
tgcaaggaattaggttttgatacagtagagtttaacgcatctgatactcgcagtaagaat
ctgataaaggaacaaatctcagaactaatatctagtacttctctgtctggatatgctaaa
ggggtgactggtaaacaagcggtaacaaagaagcatgttctggttatggacgaagtggac
ggaatggctggcaatgaggatagaggtggtctccaagaattaatttccctaataaagtca
tcttcagtgccggtaatttgcatgtgtaatgacaggaacagtgaaaaaatgcggtctttg
gtaaattactgctatgaccttcgattcagccggccgcgggttgaccagattaaggcagca
atgatgacgatatgcttcaaagaaggtgttaaagtcccaggggatgttctatcccagctg
attagtgcagcaggacaggatatccgacagaccctgcacttactgtcagtgtggacggct
gaccccactctcacagaacatgataaactccagaaggaggttcagagggtcaaaaaagat
atcaaaatgggcccatgggatgcgattcgtaaagttttttcagcagaggaacacaagacc
atgagtattatcgatcgaagcgatctgttctttacagactacagcctcgcaccactattt
gtccacgaaaactacccgcaagttgtgccccattgccccaagcatgaagtattggatcgg
atgagtaaagctgttgacagtattagccttggtgacttagttgactctaggattagatct
aatcaagcctggagtcttcttccactgcaggccatgtatagttcagttattcccggacaa
caattatcaggtcatataggtggacaaatacagttcccgagctggcttgggaaaaattca
agagcaaacaaaatgtcccgcctggcgcagaccatacacgcccatacaagactcagtaca
tcaggatcaaaatcatcaatattccttgactattcatcacatcttcgcgacgccatactt
aacccactgattaaggacaaaaatgagggtatttcaaaatcccttcaagtgcttgaagaa
taccacctactacgggatgacctggagtcacttactgaactgtcactgtggcctgggcaa
cgaaaccccagcattcttatagatgcaaaagtgaaagctgcaatgacacgtacatacaat
aaacaagcaagtgcattgccatatgcacctggtgctataaagaaggcaaaacatcttgac
actgatgaaaatggtttggaaatggatgctgaagatgatgtagaaaatgatagtgatcct
gaaaatgatttacttattaagaaaaagaaaatgaaagatttagagaaagcttccaacagc
aaagagaaaccacaatcaagtaaaggcaaaggaaagaaaacaaaatga
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